Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02869 ATGGCAACTATAGGTGTGCAAGAAATTCGTCCTCCAACTCTCTCTCCTACTTCCGAACCACCACCTCTTTTTGATGGAACTACAAGGTTATACATGAGTTATACATGCCCATTTGCTCAACGTGTATGGATCACTAGGAACCATAAGGGACTACAAGAAAAGATCAAATTGGTTCCTTTGGATCTTCAAAACAAGCCTGCTTGGTACAAAGAGAAAGTCCACCCAGAAAATAAGGTGCCTTCTCTCGAACACAATGGTAAGGTTATAGGTGAAAGCATTGACTTGATCAAATATGTTGATACAAATTTTGAAGGACCATCCCTAGTTCCTAATGATCCAGCCAAGAAGGAATTTGGAGAGGAGTTAATAAAGTATGTTGATACTTTTACCAAAGATGTGTTTGGTTCATTCAAGGGTGAACCTGTGATACAAACAAATGCTTCGTTTGACTATTTGGAGAATGCTCTTGGCAAATTTGATGGGCCATTCTTCCTTGGTGAATTTAGTTTGGTGGATATTGTGTATATTCCATTCATTGAAAGGTTCCAAATTGCTTTCTCGGAATTGTATAAGCATGACATCACAGCTGGAAGACCTAAATTTGCAATATGGATTGAGGAGCTGAACAAAAATGATGCTTACAAGCAGACAAAACTTGCTGATCCACAAGAATTTGTTGCCTTTATCAAGAAGATCTTCTTGGGACAGAAGTAA 714 0.3866 MATIGVQEIRPPTLSPTSEPPPLFDGTTRLYMSYTCPFAQRVWITRNHKGLQEKIKLVPLDLQNKPAWYKEKVHPENKVPSLEHNGKVIGESIDLIKYVDTNFEGPSLVPNDPAKKEFGEELIKYVDTFTKDVFGSFKGEPVIQTNASFDYLENALGKFDGPFFLGEFSLVDIVYIPFIERFQIAFSELYKHDITAGRPKFAIWIEELNKNDAYKQTKLADPQEFVAFIKKIFLGQK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02869 237 SFLD Main (cytGST) 29 209 - -
Vifa5g02869 237 FunFam Lambda class glutathione S-transferase 105 236 - -
Vifa5g02869 237 MobiDBLite consensus disorder prediction 1 22 - -
Vifa5g02869 237 SUPERFAMILY Thioredoxin-like 19 108 IPR036249 -
Vifa5g02869 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 6 233 IPR044629 GO:0004364
Vifa5g02869 237 FunFam Glutathione S-transferase L2, chloroplastic 1 104 - -
Vifa5g02869 237 CDD GST_C_Lambda 112 230 - -
Vifa5g02869 237 Gene3D Glutaredoxin 1 104 - -
Vifa5g02869 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Vifa5g02869 237 Pfam Glutathione S-transferase, C-terminal domain 144 206 - -
Vifa5g02869 237 SFLD Glutathione Transferase (cytosolic) 29 209 IPR040079 -
Vifa5g02869 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Vifa5g02869 237 SUPERFAMILY GST C-terminal domain-like 103 232 IPR036282 -
Vifa5g02869 237 Gene3D - 105 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02869 Vifa-Chr5 951982516 951984270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02869 8 234 Glutathione S-transferase Gene Family AT5G02790 70.175 1.01e-114 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02869 K00799 - gmx:100793025 369.392