Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02835 ATGACTGTGAACATAACCTCCATCAAAACATCCTCCAATGGAATTTGGCAAGGCGACAATCCCCTCGATTACGCCTTCCCTCTCCTCATTGTTCAAACCGTCTTAGTCCTCGTCGTTTCTCGCTCCCTCGCCCTTCTCTTCAAACCTCTCCGTCAACCAAAAGTCATCGCCGAAATCGTGGGTGGAATTCTGTTAGGCCCATCGGCTTTGGGAAGAAACACAAATTACCTACACCGGATATTCCCGTCATGGAGTACTCCAACGCTCGAATCAGTTGCAAGTATAGGATTACTATTCTTTCTCTTTCTGGTTGGACTTGAGTTAGATCTTAACTCGATCCGAAGAAGCGGAAAAAAAGCATTCAGCATAGCAGCTTTTGGAATTTCGGTTCCTTTCATATGTGGAATCGGCGTTGCCATTGTCCTCCGAAAAACCGTCGACGGCTCAGACAAAGTCGGATTCGGTCAATTCCTCGTGTTCATGGGAGTCGCGTTATCAATAACCGCATTTCCCGTTTTAGCGCGAATCCTCGCCGAACTCAAACTCCTGACAACGCGCGTGGGAGAAACCGCGATGGCAGCCGCCGCATTCAATGACTTAGCAGCGTGGATTCTACTCGCTTTGGCGATCGCGTTGGCCGGAAGTGGAGCTGACGGAGGGAAAAGTAAAAGTCCTTTGGTTTCTATTTGGGTTCTTCTCTCTGGTGTTGCGTTTGTTGCGTTTATGATGCTTGTTATTGGTCCTGTGATGAAGCGCGTGGCGCAAAGATGCTCAGCGGAAAACGAAGCTGTGAATGAAGTTTATATTTGCATAACTCTAGCGGGTGTAATGGTTTCGGGATTTATAACTGATTTCATAGGGATTCACTCGATTTTCGGGGCGTTTGTTTTTGGTTTAACCATTCCGAAAACTGGTAATTTTGCGGAGAGGTTGATAGAGAGAATTGAGGATTTTGTTTTGGGTTTGCTTCTTCCGCTTTACTTTGCTTCGAGCGGGTTGAAAACTGATGTGACCAAGATTAGCGGCGGAAAAGCGTGGGGATTGTTGGCGTTGGTGATTTCAACCGCTTGTGCTGGTAAGATTTTGGGAACTTTTGTGGTTGCGTTGATGTGCAGGATTCCTGTTAGAGAGTCAATTACACTTGGAGTTCTCATGAACACAAAAGGTCTTGTTGAGCTCATTGTGCTCAACATTGGAAAAGAGAAAAAGGTTTTGAATGATGAAATATTTGCAATATTGGTGCTTATGGCTCTATTCACTACCTTCATCACAACCCCGCTAGTGATGGCAATCTATAAACCAGCTCGAGGCATCGCAGACAAAACTATTCGCAAGTTAGGTGACATGTCCACACACTCCTCTAAAGACAAAAACGTGGGGGAAACTCTCAGAGTTTTAGCTTGCATCCATGGTCCAACCAACATTCCCGCCATCATAAACCTCATTGAATCAACACGCAGCACCAAAAACTCCCTCCTCAAAGTCTTCATCATGCACCTTGTTGAGCTCACAGAACGTTCATCTTCCATCATCATGGTTCAACGCGCTCGCAAAAACGGTTTTCCTTTCTTCAACCGGTTCAACCGCGATGAATGGTACAACCGTCTTGCTGGGGCTTTTCAGGCATATAGTCAGTTAGGCCGGGTTGTGGTCCGGTCAACAACAGAAATCTCTTCTCTATCCACAATGCATGAAGATGTATGCCACGTCGCGGAGGAAAAGAGAGTGACAATGATCATATTACCCTTCCACAAAAATTGGAGGATGGAAGTTGATGAAGAAAATAACAATGAGTCTCATGAGGTGATTGAGAATGCTGGCCATGAATGGAGAGGTGTGAACCAAAGGGTGCTTAAAAATGCCCCTTGCTCAGTTGGTGTGCTTGTGGATAGAGGATATGGGCATGGCTCGAAGAATTTGGGCTCAGAAGGTACTGTGACAGAAAGAATATGCATTGTGTTTTTTGGTGGGCCTGATGATCGTGAGGCTTTAGAGCTAGGAAAGAAAATGGCTGAGCATCCAGCTGTTGAAGTGACAGTTGTAAGGTTCGTTGAACAAGATGCAGAAAGTGGTAATAACTTTGTTTTGCGCCAGTCACCTGGGAAAAGTGCCGATGATAGCTATAGCTTCGCCATCACAAAAATGAACCGACAAAAAGAACTGGAGTTGGATGAAAATGCAATGGAGGTGTTTCGAAGCAAGTGTGGTGAAAAAGTGAAGTATATTGAGAAAGGTAGTGGCAACGTTGTGGAGGAGGTGGTAGCATTAGGGGAAAGTGTAGATTATGATCTCATAATTGTTGGAAAAGGTCGGTTTCCATCTACTATGGTGGCGGAATTAGCAGAGAGGCCAGCAGAGCATGCTGAGTTAGGTCCCATAGGAGACATTCTAACATCCTCAACAACAGGTCATAAGATGGTGTCATCAGTGCTGATTATTCAACAGCATGATGTGGCAATAACTGAGGATGCACCAATGTACAAGGTTAAGGTGCATGATGAGAATGTTGCAGAGGTTTCATCTGGCAGGCATGAGATAACTGTAGCAAATGCAGTGTAA 2559 0.4525 MTVNITSIKTSSNGIWQGDNPLDYAFPLLIVQTVLVLVVSRSLALLFKPLRQPKVIAEIVGGILLGPSALGRNTNYLHRIFPSWSTPTLESVASIGLLFFLFLVGLELDLNSIRRSGKKAFSIAAFGISVPFICGIGVAIVLRKTVDGSDKVGFGQFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDLAAWILLALAIALAGSGADGGKSKSPLVSIWVLLSGVAFVAFMMLVIGPVMKRVAQRCSAENEAVNEVYICITLAGVMVSGFITDFIGIHSIFGAFVFGLTIPKTGNFAERLIERIEDFVLGLLLPLYFASSGLKTDVTKISGGKAWGLLALVISTACAGKILGTFVVALMCRIPVRESITLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPLVMAIYKPARGIADKTIRKLGDMSTHSSKDKNVGETLRVLACIHGPTNIPAIINLIESTRSTKNSLLKVFIMHLVELTERSSSIIMVQRARKNGFPFFNRFNRDEWYNRLAGAFQAYSQLGRVVVRSTTEISSLSTMHEDVCHVAEEKRVTMIILPFHKNWRMEVDEENNNESHEVIENAGHEWRGVNQRVLKNAPCSVGVLVDRGYGHGSKNLGSEGTVTERICIVFFGGPDDREALELGKKMAEHPAVEVTVVRFVEQDAESGNNFVLRQSPGKSADDSYSFAITKMNRQKELELDENAMEVFRSKCGEKVKYIEKGSGNVVEEVVALGESVDYDLIIVGKGRFPSTMVAELAERPAEHAELGPIGDILTSSTTGHKMVSSVLIIQQHDVAITEDAPMYKVKVHDENVAEVSSGRHEITVANAV 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02835 852 Gene3D - 522 791 - -
Vifa5g02835 852 Gene3D - 28 437 IPR038770 -
Vifa5g02835 852 PANTHER CATION/H + ANTIPORTER 8 817 - -
Vifa5g02835 852 Pfam Sodium/hydrogen exchanger family 35 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa5g02835 852 FunFam Cation/H(+) antiporter 15 28 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02835 Vifa-Chr5 939223405 939229019 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02835 76 829 Antiporter Super Family AT3G53720 64.698 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02835 K26731 - jre:108999019 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02835 5 939223405 939229019 Vifa5g02835 5 939223405 939229019 ECH