Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02833 ATGTTGGCTGCATATTTTGTTTACTTGATCTTTCAACTATGGACACATAGGCAACTATTTGAAGCTGAAGATGAAGGCGGAGATGAGAACATTGAGGCAGAAGAGGCTGTGATTGGATTTTGGAGTGGATTTGCTTGGTTGGCTGGAATGACCGTGTTCACTGCGTTGTTGTCTGAATACGTGGTCGATACAATTGAGGATGCATCAGATTCATGGGGTTTATCAGTGAGCTTCCTCAGCATAATCTTGCTTCCAGTAGTTGGCAATGCAGCTGAACATGCTGGAGCAATCATTTTTGCTTTCAAGAACAAGCTTGACATTTCCTTAGGTGGTGCATTGGGCTCTGCTACTCAAATTGCCATGTTTGTGGTTCCCCTCTGTGTTACTGTTGCTTGTGGAATGGGAGTGAATATGGACCAAAACTTCAACCTCATTGAGACAGGTTCTCTTGTTGTGGCAATTATAGTCACAAGCTTCACTTTACAGGGATTGGAATCACCCGCTGATGGTAGACGTTCATCTGAGTCTAGCTACCGTATTGGAGATAATGGAACTTCAGGGGGGACAAATTAG 573 0.438 MLAAYFVYLIFQLWTHRQLFEAEDEGGDENIEAEEAVIGFWSGFAWLAGMTVFTALLSEYVVDTIEDASDSWGLSVSFLSIILLPVVGNAAEHAGAIIFAFKNKLDISLGGALGSATQIAMFVVPLCVTVACGMGVNMDQNFNLIETGSLVVAIIVTSFTLQGLESPADGRRSSESSYRIGDNGTSGGTN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02833 190 MobiDBLite consensus disorder prediction 165 190 - -
Vifa5g02833 190 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 163 IPR004713 GO:0006812|GO:0008324|GO:0016020
Vifa5g02833 190 Pfam Sodium/calcium exchanger protein 43 159 IPR004837 GO:0016020|GO:0055085
Vifa5g02833 190 Gene3D - 1 173 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02833 Vifa-Chr5 938205055 938207148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02833 1 162 Antiporters AT3G51860 73.653 4.30e-78 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02833 K07300 - gmx:100816231 265.003