Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02817 ATGATCATATTACCTTTCCACAAAAATTGGAGGATGGAAGTTGATGAAGAAAATAACAATGAGTCTCATGAGGTGATTGAGAATGCTGGCCATGAATGGAGAGAAGGTACTGTGACACAAAGAATATGCATTGTGTTTTTTGGTGGGCCTGATGATCGTGAGGCTTTAGAGCTAGGAAAGAAAATGGTTGAGCATCCAGCTGTTGAAGTGACAGTTGTAAGGTTCGTTGAACAAGATGCAGAAAGTGGTAATAATTTTGTTTTGCGCCAATCACCTGGGAAAAGTGCCGATGACAGCTATAGCTTCGCCATCACAAAAATGAACCGACAAAAAGAACTGGAATTGGATGAAAATGCAATGGAGGTGTTTCGAAGCAAGTGTGGTGAAAAAGTGAAGTATATTGAGAAAGGTAGTGGCAACGTTGTGGAGGATGTGGTAGCATTAGGGGAAAGTGTAGATTATGATCTCATAATTGTTGGAAAAGGTCGGTTTCCATTGACTATGGTGGCGGAATTAGCAGAGAGGCCAGCAGAGCATGCAGAGTTAGGTCCCATAAGAGACATTCTAACATCCTCAACAACAGGTCATAAGATGGTGTCATCAGTGCTGATTATTCAACAGCATGATGTGGCAATAACTGAGTATGCACCAATGTACAAGGTTAAGGTGCATGATGAGAATGTTGCAGAGGTTTCATCTGGCAGGCATGAGATAACTGTAGCAAATGCAGTGTAA 735 0.4163 MIILPFHKNWRMEVDEENNNESHEVIENAGHEWREGTVTQRICIVFFGGPDDREALELGKKMVEHPAVEVTVVRFVEQDAESGNNFVLRQSPGKSADDSYSFAITKMNRQKELELDENAMEVFRSKCGEKVKYIEKGSGNVVEDVVALGESVDYDLIIVGKGRFPLTMVAELAERPAEHAELGPIRDILTSSTTGHKMVSSVLIIQQHDVAITEYAPMYKVKVHDENVAEVSSGRHEITVANAV 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02817 244 Gene3D HUPs 35 182 IPR014729 -
Vifa5g02817 244 PANTHER CATION/H + ANTIPORTER 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02817 Vifa-Chr5 933701159 933702062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02817 1 211 Antiporter Super Family AT3G53720 41.532 5.59e-59 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02817 K26731 - tpra:123892200 366.696