Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02786 ATGAGTAAACTTCTAATTCCATGCCATGCCGAAGTTCTTCATCTTCGGTTCATAACCTGCACATTCATACAAAAAATCCAAGTCAATACAAGCAATCATACCAAAATACCCCCATTCCCACCGCTACCCTCATTTCACACAGTATCACAAAAAAAAGCTGCATTGTGTTTACTGCGACTGTACAGGAAAAATCCCGATGTTGTCAATGTAGATGGATGGGCGGATCGAATGGCTCAACTTTTGGATGAACGAGACCTTGGTGTTTTAACATCTTCTATGAGTCTTCTTGTTGCTTTAGTATCAAACCAACACGAGGCATATTGGAGTTGTCTTCCTAAGTGTGTCAAAACTTTAGAACGGCTTGCTAGGAATCAGGATATCCCACAAGGATACACTTATTATGGTATCCCATCTCCATGGCTTCAGGTCAAAACAATGAGAGCTCTTCAGTATTTTCCTACCATTGAAGATCCAAATACCAGAAGATCATTGTTTGAGGTCTTACAAAGGATACTGATGGGAACCGATGTTGTGAAAAATGTAAACAAAAACAATGCTTCCCATGCTGTTCTTTTTAAAGCCCTTGCTCTGGTAATGCGTCTTGATGCTGAAAAGGAGATGATGTCTCAATGTGTGGCTCTTCTCGGAAAATTTATTGTTGTCCGGGAACCAAATATTCGTTATCTTGGCTTGGAGAATATGACTAGAATGTTGATGGTTACAGATGTGCAAGATATCATAAAAAGACATCAAGCCCAAATTATTACCTCATTGAAAGATCCTGACATCAGTATTCGGAGGCATGCTCTAGATTTGCTTTATGGCATGTGTGATGTTACAAACGTAAAGGATATAGTTGAAGAACTACTGCAGTATCTCAGCACAGCAGAGTTTGCAATGCGTGAAGAGTTGTCACTTAAAGCGGCTATTCTAGCTGAGAAGTTTGCACCAGATCTTTCATGGTATGTTGACGTGATTCTTCAATTAATTGACAAGGCTGGGGATTTTGTTAGTGACGACATCTGGTTCCGAATGGTACAGTTTGTTACAAACAACGAAGACCTACAGCCTTATGCTGCAGCAAAAGCTCGAGAGTATCTTGACAAACCTGCCATACACGAGACAATGGTTAAGGTCAGTGCATATTTACTTGGGGAATTTGGACACCTTCTGGGGAGACGACCTGGGTGCAGCCCAAAGGAACTATTTAACATCATACATGAGAAGCTTCCTACTGTATCGATTCCTACTATATCTATACTTCTGTCAACATATGCTATAATTCTGATGCACTGTCAACCACCAGACCTTGAACTGCAGAATCAGATATGGGCAATATTTAAAAAAAATATGAAAGCCCAATTGAAGTTGAAATACAACAACGAAGTTGAATACCTTGCTTTGAGTAGAAAAGGTGAAGCCTTAATGGATATATTGGCTGAAATGCCTAAATTCCCTGAGAGACAGTCTGCATTAATTAAAAAGGCCGAAGATACTGAAGTTGATACTGCAGAAACAAGTGCCATTAAGTTGCGTGCTCAGCAACAATCTCAAACATCAAATGCTTTGGTTGTAACGGACCAAAGTCAAGCTAACGGAGCTCCTCCGCATGATGATGTTGCGGAGGCGCTTTCGAGGCAGTATTGGGAATACAATGTGCTTGACTATGAAGAGAAAGTAGTTGATGGTTTTTATGACATATATGGCCTCTATAATGACCCAGCAATGCAAGGAAAGATGCCATCTCTAGCTGATCTTGAAACAAACTCAGGTGGTTCTAGCTTTGAAGTAGTCATAGTTAATAGAACAATTGATCCTGCCCTGGACGAGTTGGTGCAAATTGCACACTGTATAGCATTGGACTGCCCTGTCTCTGAGATTGGTATTTTGGTGCAAAGGCTTGCTGAACTTGTTACTAGCCATATGGGCGGCCCTGTAAAAGATGCTAATATTATATTAACAAAATGGACAGAGAGAAGTACAGAATTAAGGACATCTCTTCACACAAGTGTATTACCTCTTGTGTCCTTAGATATTGGGCTCTCTAGGCATCGCGCTTTACTTTTCAAGATATTAGCAGTCAACATTCAGATGCCTTGTAGTCTGGTTAAAGGTAGTCATTACACTAGTGTTGAGGATGATGCTGTCAACATTATAAAATTAGATGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCAGCTGATATTTTAAATGCGAAGGATAATGACCTTTAA 2256 0.4025 MSKLLIPCHAEVLHLRFITCTFIQKIQVNTSNHTKIPPFPPLPSFHTVSQKKAALCLLRLYRKNPDVVNVDGWADRMAQLLDERDLGVLTSSMSLLVALVSNQHEAYWSCLPKCVKTLERLARNQDIPQGYTYYGIPSPWLQVKTMRALQYFPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHAVLFKALALVMRLDAEKEMMSQCVALLGKFIVVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIITSLKDPDISIRRHALDLLYGMCDVTNVKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRMVQFVTNNEDLQPYAAAKAREYLDKPAIHETMVKVSAYLLGEFGHLLGRRPGCSPKELFNIIHEKLPTVSIPTISILLSTYAIILMHCQPPDLELQNQIWAIFKKNMKAQLKLKYNNEVEYLALSRKGEALMDILAEMPKFPERQSALIKKAEDTEVDTAETSAIKLRAQQQSQTSNALVVTDQSQANGAPPHDDVAEALSRQYWEYNVLDYEEKVVDGFYDIYGLYNDPAMQGKMPSLADLETNSGGSSFEVVIVNRTIDPALDELVQIAHCIALDCPVSEIGILVQRLAELVTSHMGGPVKDANIILTKWTERSTELRTSLHTSVLPLVSLDIGLSRHRALLFKILAVNIQMPCSLVKGSHYTSVEDDAVNIIKLDDEREFLVDLMAAPGTLIPADILNAKDNDL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02786 751 Gene3D - 46 501 IPR011989 -
Vifa5g02786 751 Pfam Ethylene-responsive protein kinase Le-CTR1 541 739 - -
Vifa5g02786 751 SUPERFAMILY ARM repeat 49 439 IPR016024 -
Vifa5g02786 751 Pfam Adaptin N terminal region 50 426 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vifa5g02786 751 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 50 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02786 Vifa-Chr5 922678963 922681315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02786 540 749 MAP Kinase Kinase Kinase AT1G08720 62.857 2.11e-86 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02786 K11824 - gmx:100793930 874.389