Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02764 ATGTCCATAAACAATAATGTGATAGATGTTTTACAAGATCAAAAGTGGGCGCCTATGTCCTGGAAAAAGTTGCAGGTCGGAGATATTATCAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACACTGGAGAGGAAACTTGACAAGCTCATACTCGCTCTCTTTGCAACACTCTTTATGATGTGTTTCATTGGAGCTATAGGCAGCGCTATTTTTGTGAACAAAAAATACTTCTATTTACATCTTGATTCATCAGAGGAGGGCTCAACACAGTTCAATCCAAAAAACAGATTTCTGGTTTTTATCCTGACTATGTTTACCCTTATCACACTGTATTCAACAATCATCCCAATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGATTTGGGAATGTACCACAATGAAACTAATACACCGGCACTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGACAAGTGGAATACATTTTCTCTGACAAAACTGGGACCCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCGATAGGAGTAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGACTAGCAGAGCGTAATGGCATGAAAATTGAGGAAAATAAACCGCCCCATACTGTGCATGAGAAGGGTTTCAATTTTGAAGATGCCAGGCTTATGAGAGGAGCTTGGAGGAATGAACCCAATCCTGATGCCTGCAGACAATGTATCAATGAAGATGTTGAAAAGGACGATATAAATGATGAAATTCAAGAGGACGACATAAATGATAAAATTCAAGAGGACGACCTAAATGATAAAATTCAAGAGGACGACGTAGATGACGAATTTCAAGAGGACGACATAGATCTAGATGATGAATTTCAAGAGGAGGATATAGATGGTGAATTTCAAGAGGACGATGTAGATGAAGAATTTATGGAGGATGACATATCTAACGAATTTCAAGAGGACGATCTGGATGCTTTACTCCAAGAAGACAAACTTGAATGA 1044 0.3764 MSINNNVIDVLQDQKWAPMSWKKLQVGDIIKVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSTQFNPKNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGVEVYGNGVTEIERGLAERNGMKIEENKPPHTVHEKGFNFEDARLMRGAWRNEPNPDACRQCINEDVEKDDINDEIQEDDINDKIQEDDLNDKIQEDDVDDEFQEDDIDLDDEFQEEDIDGEFQEDDVDEEFMEDDISNEFQEDDLDALLQEDKLE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02764 347 Gene3D - 169 181 IPR023214 -
Vifa5g02764 347 Gene3D - 38 168 - -
Vifa5g02764 347 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 166 IPR023298 -
Vifa5g02764 347 ProSitePatterns E1-E2 ATPases phosphorylation site. 174 180 IPR018303 -
Vifa5g02764 347 MobiDBLite consensus disorder prediction 261 314 - -
Vifa5g02764 347 MobiDBLite consensus disorder prediction 328 347 - -
Vifa5g02764 347 FunFam Phospholipid-transporting ATPase IC 169 181 - -
Vifa5g02764 347 Gene3D - 182 204 IPR023299 GO:0000166
Vifa5g02764 347 MobiDBLite consensus disorder prediction 261 276 - -
Vifa5g02764 347 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 253 - -
Vifa5g02764 347 MobiDBLite consensus disorder prediction 283 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02764 Vifa-Chr5 918199210 918202998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02764 1 32 Primary Pumps ATPases AT1G59820 59.375 3.07e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02764 K14802 - gmx:100787473 419.083