Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02744 ATGGGGTTGTGTACGAATGGATTCATGAATGATATTCAGTGGAGAATTCTAAGTGGAAAAAGTTGTTATCTAGAGCATTTACCGTTGTTTTCACGAGCTGCTGCAAATTTTCGAAAGTGTTTTGATCCCATTGTTGCAATATCTGGCCATGACCTGTTTCCTGTTATGGTCTATGGGAGAAATGTTTCTGGCCAAGAATTTGGGGGAATGTATTGCATTGTTTTTATTTTGAATTCTATTGTAGTATCTGTCAGGCTTCTTAAGATTTTTGGCTGCAATATTGATGAGCTTCCCCTGGTAGCTACAAGTAGAGAGTATCAAGAAAAAGGTTATTTTCAAGTGTTGCTCTCTTGCATAGAGAGGTTGTTGTCTTCTCTAAATGTAGAAAAGCTGGTTCTCTCTGCTGCAGGGGATGCAGAGTCAATTTGTACTAAGAAATTAGGCTTTTACAAGATGAGTGAAGATCAGTTATCCAAATATCTTAAAGAGGGTCTCTACTATTTCAAAACCATGAAAGAGCATTACGGATTTGAGCCTTCGATGGATCACTATGGTGCCATGGTTGACCTTCTCGGTCGAGCTGGAAAGATAGTGATGCCAATGATAGTATAA 612 0.3873 MGLCTNGFMNDIQWRILSGKSCYLEHLPLFSRAAANFRKCFDPIVAISGHDLFPVMVYGRNVSGQEFGGMYCIVFILNSIVVSVRLLKIFGCNIDELPLVATSREYQEKGYFQVLLSCIERLLSSLNVEKLVLSAAGDAESICTKKLGFYKMSEDQLSKYLKEGLYYFKTMKEHYGFEPSMDHYGAMVDLLGRAGKIVMPMIV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02744 203 Gene3D - 50 178 - -
Vifa5g02744 203 PANTHER AUTOIMMUNE REGULATOR 10 172 - -
Vifa5g02744 203 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 68 154 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02744 Vifa-Chr5 910932679 910933290 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02744 10 163 PHD Transcription Factor Family AT3G53680 67.532 1.74e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02744 - - tpra:123904992 275.018