Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g02706 | ATGATAATGGAAGCTACAATGAACTTCAATGAACAGTGTAGGATAGGGAAATCAGTGTACAAAGCTATAATAGACGGTCATGTTTTAGCTGTGAAAAATGTTAAGGAAGACATCACAGTAACTGAAGAGTTGATGATTCTTCCAAAGGTAAATCATGCAAATCTTGTAAAACTAATTGGTGTCTCTTCAGGATATGTTGGAAATCACTTTCTTGTATATGAATATGATGAAAATGGATCACTTTATAACTGGCTGTTCTCTGAATTTTCCACTGCTTCAAGCTCAGTGGCTTCCCTCACATGGAATCAGAGGTTAAGCATATCAATCGATGTTGCAATTGGTCTGCAATACATGCATGAACACATAGAACCAAGTATAGTCCATAGAGACATCACATCACATCAAGTAACATCCTTCTTGACTCAAACTTTAAGGCTAAGATATCAAGATTTTCAGTTGCAAGGAACTACAAAGAATCCTATGATAACAAAAGTAGATGTTTTCGCTTACGGGGTTGTTCTGTTAGAGTTATTAACAGGAGAGAAGTTTTTGTCGTATAGCGAAAACAGCAAAGTGAATATGTTATGGAAAGATATTAAGGGTGTGTTTGATATAGAAGAGAAGAGAGAGAAAAGGGTTAGAAGATGGATGGATCCTAAGTTGGGGAGACCAACTATGGGAGAAGTTGTTCTTAATTTTTCCCTTCTCACTCAACATTCTCCTACTTTGTTAGAGAGGTCTTGTATTTATGGATCAGATGTTGAGGTTATAGCTGGAACGGTTACTTCAATCATAGGTCGTTGA | 804 | 0.3657 | MIMEATMNFNEQCRIGKSVYKAIIDGHVLAVKNVKEDITVTEELMILPKVNHANLVKLIGVSSGYVGNHFLVYEYDENGSLYNWLFSEFSTASSSVASLTWNQRLSISIDVAIGLQYMHEHIEPSIVHRDITSHQVTSFLTQTLRLRYQDFQLQGTTKNPMITKVDVFAYGVVLLELLTGEKFLSYSENSKVNMLWKDIKGVFDIEEKREKRVRRWMDPKLGRPTMGEVVLNFSLLTQHSPTLLERSCIYGSDVEVIAGTVTSIIGR | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g02706 | 267 | Gene3D | Transferase(Phosphotransferase) domain 1 | 77 | 156 | - | - | |
Vifa5g02706 | 267 | ProSiteProfiles | Protein kinase domain profile. | 1 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa5g02706 | 267 | Pfam | Protein tyrosine and serine/threonine kinase | 31 | 155 | IPR001245 | GO:0004672|GO:0006468 | |
Vifa5g02706 | 267 | Gene3D | Transferase(Phosphotransferase) domain 1 | 157 | 247 | - | - | |
Vifa5g02706 | 267 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 229 | IPR011009 | - | |
Vifa5g02706 | 267 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 75 | - | - | |
Vifa5g02706 | 267 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 2 | 225 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g02706 | Vifa-Chr5 | 902747211 | 902748090 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa5g02706 | 2 | 249 | Receptor kinase-like Gene Family | AT2G33580 | 33.808 | 9.57e-36 | 132 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Vifa5g02706 | PK_Tyr_Ser-Thr | 6.7e-14 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g02706 | - | - | gmx:100301877 | 276.174 |