Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02678 ATGGCAAAGGAGGTGCTAAATGCACTTGATGTGGCGAAAACGCAATGGTACCATTTCACAGCAATCATCATAGCCGGTATGGGCTTCTTCACAGATGCATATGATTTGTTCTGTATTTCTCTTGTTACCAAGTTGCTTGGCAGAATATATTATCATGTTGATGGTGCACCGAAGCCGGGAAATTTGCCTCCGAATGTATCGGCGGCTGTAAATGGGGTTGCTTTCGTTGGAACACTTTCAGGGCAGCTTTTCTTCGGCTGGCTTGGTGATAAGTTGGGTAGGAAAAAAGTGTATGGAATGACACTCATGATTATGGTAATCTGTTCAATTGGTTCAGGTCTTTCTTTTGGACACACTCCAGAAACTGTCATGGTAACTCTTTGCTTTTTCCGCTTTTGGCTTGGGTTTGGTATCGGTGGAGATTACCCGCTTTCGGCAACCATAATGTCCGAATATTCCAATAAGAAGACTCGTGGTGCCTTCATTGCTGCAGTCTTTGCCATGCAGGGGTTTGGAATTTTGGCAGGTGGTATATTTGCAATCATGATGGCTGCTATATTCAAGGCCAACTTTGATTCTCCACCGTATGCGGTTGATCCACTTGGTTCAACGGTTCCACAAGCAGACTTCGTTTGGAGGATAATCGTGATCGTAGGAGCATTCCCAGCTTTACTGACTTACTATTGGAGGATGAAGATGCCCGAAACTGCCCGTTACACCGCTTTAGTTGCTAAGAATACGGCACAGGCAGCAGCAGATATGTCTAAGGTTCTACAGGTTGAGATTCAAGCTGAACCAGAGATAGAAGTGAAGAAGAAATATGGCTTGTTCTCACCGGAGTTTCTAAGTCGCCATGGATGGCATCTTCTTGGTACAGCAACCACTTGGTTCTTGCTTGATATAGCGTTTTATAGCCAAAATCTATTTCAGAAGGATATCTTCAGTGCAGTTGGTTGGATACCTCCTCCACAAACCATGAATGCACTTGAGGAGGTTTACAAAATTGCAAGAGCTCAAACACTTATTGCTCTTTGCAGTACGGTTCCAGGTTACTGGTTTACAGTGGCTCTCATTGATAGGATAGGAAGATTTAAAATTCAATTGATGGGATTTTTCTTTATGACAGTGTTCATGTTTGCACTTGCCATTCCTTATGATCATTGGACTCATAAGGATAACCGAATAGGATTTGTAGTATTATATTCCTTGACCTTTTTCTTTGCAAATTTCGGACCTAATGCTACCACATTTGTTGTACCGGCAGAGATTTTTCCTGCTAGATTCCGTTCTACTTGTCATGGAATATCATCCGCAGCGGGAAAGCTTGGTGCTATAGTTGGTGCATTCGGGTTCTTGTACTTGGCACAAAACCAGGACAAGAGTAAAGCTGATGCAGGGTATCCTGCAGGTATTGGTGTGAAGAATTCCCTGATAGTGTTGGGTATAGTTAACATTTTGGGATTCGTTTTTACTTTCTTGGTGCCCGAGGCAAATGGAAAATCATTAGAGGAGATGTCAGGTGAGAATGAAGAGGAAGATGAAGTCAATGAAGAGCTGGAGCAATCTCCTTCTAATAGCCAAAGAACAGATTCACTTGTTTAG 1602 0.4282 MAKEVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGNLPPNVSAAVNGVAFVGTLSGQLFFGWLGDKLGRKKVYGMTLMIMVICSIGSGLSFGHTPETVMVTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIMMAAIFKANFDSPPYAVDPLGSTVPQADFVWRIIVIVGAFPALLTYYWRMKMPETARYTALVAKNTAQAAADMSKVLQVEIQAEPEIEVKKKYGLFSPEFLSRHGWHLLGTATTWFLLDIAFYSQNLFQKDIFSAVGWIPPPQTMNALEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFKIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAIVGAFGFLYLAQNQDKSKADAGYPAGIGVKNSLIVLGIVNILGFVFTFLVPEANGKSLEEMSGENEEEDEVNEELEQSPSNSQRTDSLV 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02678 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 497 - -
Vifa5g02678 533 SUPERFAMILY MFS general substrate transporter 9 506 IPR036259 -
Vifa5g02678 533 Gene3D MFS general substrate transporter like domains 17 522 IPR036259 -
Vifa5g02678 533 MobiDBLite consensus disorder prediction 502 533 - -
Vifa5g02678 533 FunFam Inorganic phosphate transporter 1-6 17 520 - -
Vifa5g02678 533 Pfam Sugar (and other) transporter 23 506 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa5g02678 533 NCBIfam phosphate:H+ symporter 8 508 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vifa5g02678 533 Coils Coil 502 522 - -
Vifa5g02678 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 499 IPR020846 GO:0022857
Vifa5g02678 533 CDD MFS_PhT 22 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02678 Vifa-Chr5 893074442 893076043 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02678 4 514 Inorganic Solute Cotransporters AT3G54700 82.651 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02678 K08176 - gmx:100803626 902.508