Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02677 ATGGCCAAGGATCAAATTCAGGTGCTAAATGCACTTGATGTGGCGAAAACACAATGGTACCATTTCACTGCGATCATCATAGCTGGTATGGGCTTCTTTACTGACGCGTATGATTTGTTCTGTGTATCGCTTGTCACGAAGTTGCTCGGCCGTATATACTACCATGTTGATGGTGCAGCGAAGCCAGGAACATTGCCTCCGAATGTATCAGCGGCTGTAAATGGTGTTGCATTCATTGGAACACTTTCAGGACAGCTTTTCTTTGGTTGGCTTGGTGATAAGTTGGGTAGGAAAAAAGTATATGGCATGACACTCATGATTATGGTTATTTGTTCAATTGGTTCTGGCCTTTCTTTTGGACACACTCCAGAAACTGTCATGGCAACTCTTTGTTTTTTCCGCTTCTGGCTTGGATTTGGTATCGGTGGAGACTACCCGCTTTCGGCTACCATAATGTCAGAATATTCTAATAAGAAAACTCGTGGTGCCTTCATCGCCGCAGTCTTTGCCATGCAGGGGTTTGGAATTTTGGCAGGTGGTATATTTGCAATCATAATAGCTTCTATATTCAAGGCCAAATTTGATTCTCCGTCGTACGCGGTTGATCCACTTGGTTCAACGGTTCCACAAGCAGACTTCGTTTGGAGGATAATCGTGATCGTAGGAGCATTCCCAGCTGCATTGACTTACTATTGGCGGATGAAGATGCCAGAAACGGCCCGTTACACCGCTTTAGTTGCTAAGAACACGGCACAGGCAGCAGCAGATATGTCTAAGGTTCTACAAGTTGAGATTCAAGCTGAACCAGAGGAAGAAGTGAAGGAGAAATATGGCTTGTTCTCCAAGGAGTTTCTAAGTCGCCATGGACTACATCTTCTCGGTACAACAAGCACTTGGTTCTTGCTTGATATAGCATTTTATAGCCAAAATCTCTTCCAGAAAGATATCTTCAGTGCAATTGGTTGGATACCTCCTGCACAAACCATGAATGCACTTGAGGAGGTTTACAAAATCGCAAGAGCTCAAACACTTATTGCTCTCTGCAGTACAGTTCCAGGTTATTGGTTTACGGTGGCTCTCATTGACAGGATAGGAAGATTTAAAATTCAATTGATGGGATTTTTCTTTATGACCGTGTTCATGTTTGCGCTAGCCATTCCTTATGATCACTGGACTCATAAAGATAACCGAATTGGATTTGTAGTATTGTATTCCTTGACGTTCTTCTTTGCAAATTTCGGCCCTAATGCTACCACATTTGTTGTGCCAGCTGAGATTTTTCCTGCCAGATTCCGTTCTACTTGCCATGGAATATCATCCGCAACAGGAAAGCTTGGTGCTATAGTTGGTGCATTCGGGTTCTTGTACTTGGCACAAAACCCGGACAAGAGTAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCTCTGATAGTGTTGGGTGTGGTTAACATTTTGGGATTCCTCTTTACTTTCTTGGTGCCTGAGGCAAATGGAAAATCATTGGAAGAGATGTCAGGTGAGAATGAAGAGGAGGAAGTTGGAAGCAAAGATGTAGAGAAATCTCATGCTAACAACAACGGCACTGTTACACATATTTAG 1611 0.4333 MAKDQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCVSLVTKLLGRIYYHVDGAAKPGTLPPNVSAAVNGVAFIGTLSGQLFFGWLGDKLGRKKVYGMTLMIMVICSIGSGLSFGHTPETVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIIASIFKAKFDSPSYAVDPLGSTVPQADFVWRIIVIVGAFPAALTYYWRMKMPETARYTALVAKNTAQAAADMSKVLQVEIQAEPEEEVKEKYGLFSKEFLSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQTMNALEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFKIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSATGKLGAIVGAFGFLYLAQNPDKSKADAGYPAGIGVKNSLIVLGVVNILGFLFTFLVPEANGKSLEEMSGENEEEEVGSKDVEKSHANNNGTVTHI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02677 536 MobiDBLite consensus disorder prediction 506 536 - -
Vifa5g02677 536 NCBIfam phosphate:H+ symporter 11 511 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vifa5g02677 536 FunFam Inorganic phosphate transporter 1-6 20 523 - -
Vifa5g02677 536 CDD MFS_PhT 25 499 - -
Vifa5g02677 536 SUPERFAMILY MFS general substrate transporter 11 509 IPR036259 -
Vifa5g02677 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 502 IPR020846 GO:0022857
Vifa5g02677 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 500 - -
Vifa5g02677 536 Pfam Sugar (and other) transporter 26 509 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vifa5g02677 536 Gene3D MFS general substrate transporter like domains 20 526 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02677 Vifa-Chr5 892408281 892409891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02677 1 510 Inorganic Solute Cotransporters AT2G38940 85.465 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02677 K08176 - gmx:100803626 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02677 5 892408281 892409891 Vifa5g02677 5 892408281 892409891 ECH