Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02676 ATGGCCAAGGATCAAATTCAGGTGCTAAATGCACTTGATGTGGCGAAAACCCAATGGTACCATTTCACTGCGATCATCATAGCTGGTATGGGCTTCTTTACTGACGCGTATGATTTGTTCTGTGTATCGCTTGTCACGAAATTGCTAGGTCGTATATATTACCATGTTGAGGGTGCAGAGAAGCCGGGAACATTGCCTCCGAATGTATCAGCGGCTGTAAATGGTGTTGCCTTCGTTGGAACACTTTCGGGACAGCTTTTCTTTGGTTGGCTTGGTGATAAGTTGGGTAGGAAAAAAGTGTATGGCATAACGCTCTTGTTGATGGTTATTTGTTCAATTGGTTCTGGCCTTTCTTTTGGACATAATCCAAAAACTGTCCTTTCAACTCTTTGCATTTTTCGATTCTGGCTTGGGTTCGGTATTGGTGGAGATTACCCGCTTTCGGCTACTATAATGTCAGAGTATTCTAATAAGAAGACTCGCGGTGCATTTATTGCCGCAGTCTTTGCCATGCAGGGGTTTGGAATTTTGGGAGGTGGTTTATTTGCAATCATAATTTCAGCTGCCTTCAAGGCCTATTTTGATTCTCCGTCGTACGAGGTTGATCCACTTGGTTCAACTGTTCCGCAAGCAGACTACATTTGGAGGATAATTGTGATGGTTGGAGCAATCCCGGCTGCATTGACTTACTACTCGCGAACAAAGATGCCAGAAACGGCTCGTTACACTGCTTTAGTTGCGAAGAATACCGCACAGGCTGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTGAAGTTGATCCGGTGAAAGAGGAGCAGTCAAAGGTTAAACCATATGGCTTTTTCTCGAAAGAGTTCCTTCGACGCCATGGACTACATTTACTTGGTACTGCAAGTACTTGGTTCTTGCTTGATATAGCATTTTACAGTCAAAATCTCTTCCAGAAGGATATTTTCACCGCGGTTGGTTGGATTCCTCCTGCAAAAACGATGAATGCGATTGAGGAGGTTTACAAAATTGCAAGAGCTCAAACACTTATTGCTCTCTGCAGTACAGTTCCAGGTTATTGGTTTACGGTGGCTCTCATTGACAGGATAGGAAGATTTAAAATTCAATTGATGGGATTTTTCTTTATGACAGTGTTCATGTTTGCGCTAGCCATTCCTTATGATCACTGGACTCATAAAGATAACCGAATTGGATTTGTAGTATTGTATTCCTTGACGTTCTTCTTTGCAAATTTCGGGCCTAATTCAACCACATTTGTTGTAGCGGCCGAGATTTTTCCTGCCAGATTCCGTTCAACTTGCCATGGAATATCATCCGCAGCAGGGAAGCTCGGTGCTATAGTTGGTGCATTCGGGTTCTTGTACTTGGCACAAAACAAGGACAAGAGTAAAACAGATGCAGGGTACCCTGCAGGTATCGGTGTGAAGAATGCACTGATTTTGTTGGGTTGTGTTAACGTTGCGGGGTTCTTTTGTACTCTATTCATGGTACCTGAAGCAAAAGGAAAATCTTTAGAGGAGATGTCAGGTGAGAATGAAGAGGAGGAAGTTGAAAGCCAAGATGTAGAAAAATCTCATGCTAACAACAATAGTACTGTTACACATATTTAA 1623 0.4282 MAKDQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCVSLVTKLLGRIYYHVEGAEKPGTLPPNVSAAVNGVAFVGTLSGQLFFGWLGDKLGRKKVYGITLLLMVICSIGSGLSFGHNPKTVLSTLCIFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGLFAIIISAAFKAYFDSPSYEVDPLGSTVPQADYIWRIIVMVGAIPAALTYYSRTKMPETARYTALVAKNTAQAAADMSKVLQVEIEVDPVKEEQSKVKPYGFFSKEFLRRHGLHLLGTASTWFLLDIAFYSQNLFQKDIFTAVGWIPPAKTMNAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFKIQLMGFFFMTVFMFALAIPYDHWTHKDNRIGFVVLYSLTFFFANFGPNSTTFVVAAEIFPARFRSTCHGISSAAGKLGAIVGAFGFLYLAQNKDKSKTDAGYPAGIGVKNALILLGCVNVAGFFCTLFMVPEAKGKSLEEMSGENEEEEVESQDVEKSHANNNSTVTHI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02676 540 MobiDBLite consensus disorder prediction 510 540 - -
Vifa5g02676 540 FunFam Inorganic phosphate transporter 1-6 20 527 - -
Vifa5g02676 540 Coils Coil 509 529 - -
Vifa5g02676 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 504 - -
Vifa5g02676 540 NCBIfam phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vifa5g02676 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Vifa5g02676 540 CDD MFS_PhT 25 503 - -
Vifa5g02676 540 Gene3D MFS general substrate transporter like domains 20 530 IPR036259 -
Vifa5g02676 540 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Vifa5g02676 540 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02676 Vifa-Chr5 892068776 892070398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02676 1 520 Inorganic Solute Cotransporters AT3G54700 81.923 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02676 K08176 - gmx:100819445 915.605