Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02663 ATGGGTAGCAATTTACATCAGCTACTCAGAAGTCTTTGTTTCAATACTCATTGGAATTATGCTATATTTTGGAAACTCAAACATTGTCCTCCAAATCCAATGATCTTAACATTGGAGGATGCTTACTATGATAATTCGGATTATTTTGACTCTTCAGAAAATAAGTACTGTCAAAAGGCCTTGGAACAGATTAAGGGTGGGAAGTTTTCTGATGAAGCTTTGGGGTTAGCTGTGGCAAAGATGTCTTATAATGTATACACATTAGGGGAAGGTGTTGTTGGACAGGTAGCTGTTACTGGAAAAGATCGGTGGATTTGTGCAGATGATCAAGTTACAAGTTTGGGTTTGTCTTTTGAGTTTGATGATTTGTGGCAAACTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTGTCTGTAGTCCCACTTGGCGTTGTTCAGCTTGGTTCTCTAATAAAAGTGAATGAAGATATGGGGGTTATTAATCATATAAGAAATCTATTTTTGTCTACTCAAGATTACTCAATAGACCACATTCCGAGCCAAATACAACGTAGTTTGAAAAGCTCTTCATCTCAGGGTATCTTGAAGGAAAAATCATCGTCAGATATTATGCCTGCTTGCATGACGAATGAAACAGTGGATGTTTTGATGCCCCTTCAATGTTCTGGGAGCAACAGTGCTACTAATTCTGCATATTGGGAAACGGGTGATGATGTGGTCAAGCTCGAAGGACCCGAGCTCAATAGTGTTTTGAGCCCCATTTTGCTTCGGTCAACGTTTGATATGATTAATGTAGAGCATCAGGAATTTGGAGAGATAGGACCTCTAAGTGCGAGGGAGTGTGCAGGGGGCAGTGATGGCTGCAAAATTATGAGATTGGAATCGGAACAAAATCTATCATCATTTTTGAACAATTCTGTTATAAATAATGACGGCGTCAGTGATTTGATACACCATTCTGAAAAGGCCAGAGTTGATTCTGCATGCTTTCCTACAGATTTTCTTGACACATATGTTTCTGAAAGTGACAAGTTCGGTAAACACAGCAAAAAGTCAGAATTTTGGACTGTGCCTTGTGGCCAGGATACCTCCTATACAGAGTTGAGTTTTCCGGCTGGCTGTGAACTACACGAAGCACTTGGACCAGCATCTTTGAAAGGGAGTAAATATTTTGATTCGCTGGCACAGGTTAATCAAGATGTGAAAGTTATGGATATGCCAGACACAGTTAACACTAGTCAATCGACTCCGGAGCATCTTTTGGAAGCAATGGTGGCCAACATTTGTCACAGTAGTAATAATGATGTTAATAGTGAATCATCATTTTATAGATCAAAGCAATCTGCAATAAGTTCTGGCAAAAAACCTGAAGTTTCTATTCAAAATGTGCATACTACTGTTAATCCAGAAAGCTATTCAATAGATCATCCTTGTCTTTTCAGAGAGGAAAAACACCATTGTTTGAGCTCATCGTCAGGGGTATGCGGTGTTATGTCATCTCAAGGCATTTCTTCTATATGTCCTAGTGCTTGTAGTGAACAACTCGAAAGGTCATCTGAACCATCTAAAAACATCAAAAAGAGGGCTAGACCTGGAGAAAGTTGCAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTGAGAGATTTGGTTCCAAATGGTGCAAAGTGCAGTATTGATTCTCTACTGGAGCGCTCAATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACGAAGTTCGCTAATTCTAAATCAAAGATGCATCATTTGGAAGCAAACATTCTTGGATCCTCCAGTAATGAGCAGGGTTCAAGTTGGGCAATGGAGGTAGGGGGTCATCTAAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAACGGACAGATGCTTGTTGAGATGCTATGTGAAGAGTGGAGCTATTTTCTTGAAATAACGGAAGCCATAAGAAGCTTAGGCCTTACAATTTTGAAGGGTGCAACAAAAACTCGCGATGACAAGATGTTAATATGCTTTATTGTTGAGGTTGAAAACAACAAAAATGTACACCGATTGGACATCTTGTGGCCGCTTGTTCAGATATTGCAATCAAAGAGCACTGTAAAGCAACAGTAA 2151 0.398 MGSNLHQLLRSLCFNTHWNYAIFWKLKHCPPNPMILTLEDAYYDNSDYFDSSENKYCQKALEQIKGGKFSDEALGLAVAKMSYNVYTLGEGVVGQVAVTGKDRWICADDQVTSLGLSFEFDDLWQTQFSAGIRTIVVVSVVPLGVVQLGSLIKVNEDMGVINHIRNLFLSTQDYSIDHIPSQIQRSLKSSSSQGILKEKSSSDIMPACMTNETVDVLMPLQCSGSNSATNSAYWETGDDVVKLEGPELNSVLSPILLRSTFDMINVEHQEFGEIGPLSARECAGGSDGCKIMRLESEQNLSSFLNNSVINNDGVSDLIHHSEKARVDSACFPTDFLDTYVSESDKFGKHSKKSEFWTVPCGQDTSYTELSFPAGCELHEALGPASLKGSKYFDSLAQVNQDVKVMDMPDTVNTSQSTPEHLLEAMVANICHSSNNDVNSESSFYRSKQSAISSGKKPEVSIQNVHTTVNPESYSIDHPCLFREEKHHCLSSSSGVCGVMSSQGISSICPSACSEQLERSSEPSKNIKKRARPGESCRPRPRDRQLIQDRIKELRDLVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKFANSKSKMHHLEANILGSSSNEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEEWSYFLEITEAIRSLGLTILKGATKTRDDKMLICFIVEVENNKNVHRLDILWPLVQILQSKSTVKQQ 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02663 716 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 530 579 IPR011598 GO:0046983
Vifa5g02663 716 MobiDBLite consensus disorder prediction 518 544 - -
Vifa5g02663 716 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 168 IPR025610 -
Vifa5g02663 716 MobiDBLite consensus disorder prediction 520 544 - -
Vifa5g02663 716 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 713 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02663 Vifa-Chr5 886562172 886571423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02663 1 714 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.744 7.40e-149 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02663 - - mtr:25499239 995.727