Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02649 ATGTTTCAACTTGATGTGCTTCTTCCGTATATTCTCTTGTTAATCTTTCCCGTAGTACTCTTCTTCTTAACAAAACCAACCAACAAGAACATCAGCATCCCAAAATCATATCCACTCATCGGCTCTTACTTATCTTACAGAAACAACTTACACCGCCGCATCCAGTGGCTCTCCGATATCATCCAAATCTCCCCCTCCGCCACTTTCCAACTCGACGGCGCCTTAGGTAAACGCCAAATCATCACCGGAAACCCATCCACAGTCCAACACATTCTCAAAAACCAATTTTCCAATTACCAAAAAGGCACATCCTTCACAACAACCCTCTCCGATTTCTTAGGAACCGGAATCTTCAACACAGACGGCCAAAACTGGAAGTTCCAAAGACAGGTAGCAAGCCACGAATTCAACACCAAATCAATCCGTAACTTCGTGGAACACATAGTCGACACAGAACTCACCAGCCGTTTAATCCCAATCCTATATTTATCAACCCAAACAAACCAAATCCTCGACTTCCAAGATATTCTCCAACGTTTCACTTTCGACAACATCTGCAAAATCGCGTTCGGTTTCGATCCAGAGTATCTAACTCCGTCAACTAACAGAACAAGATTCGCACTAGCTTACGAAGACGCAATGGAAATAAGCTGCAAACGTTTCCGTTTACCATTACCAATCATATGGAAAATAAAAAGATACTTCAACATAGGTTCGGAGAAGCGTCTCAAGGAAGCAGTAACAGAAGTACGGGAATTCGCGAAAAATATAGTACGAGAAAAAAAACGAGAGTTGGAAGAAACATCATCGCTTCAAACAGAAGACATGTTATCACGTTTTTTAAGTTCTGGTCATTCAGAAGAAGAGTTTGTTACGGATATGGTAATAAGTTTTATTTTAGCAGGGAAAGATACAACTTCAGGTGCATTAACATGGTTTTTCTGGCTACTATGGAAGAATCCACGTGTTGAGGAAGAGATTGTGAAGGAAGTGAGTAAAAAATCCGAGTCGTTGGTTTATGATGAAGTGAAGGAAATGGTTTATACGCATGCAGCGTTGAGTGAGAGTATGAGATTGTATCCACCCGTGCCGATGGATACTAAGGAAGCTGTGAAAGACGATGTTTTACCGGATGGGAGGTTTGTGAAGAAAGGGACGATGGTGACTTATCATGTTTATGCGATGGGGAGGATGAAGAGTTTGTGGGGGGATGATTGGGCTGAGTTTAGGCCGGAGAGGTGGTTAGAGAGAGATGTGGTGAATGGGAAATGGGTTTTTGTGGGGAGAGATTTATATTCTTATCCGGTTTTCCAGGCTGGGCCTAGGGTTTGTTTGGGGAAGGAAATGGCTTTTATGCAAATGAAGAGGATTGTTGCTGGGATTGTTGGGAAGTTTAAGGTGGTTCCTGAGGGGAATAAGGATGAACATCCTGGTTTTATTTCTTTTTTGACTTCGCAGATGGAAGGTGGGTTTCCTGTCACCATTCAAAAGAAGTTTCCTTGA 1503 0.4238 MFQLDVLLPYILLLIFPVVLFFLTKPTNKNISIPKSYPLIGSYLSYRNNLHRRIQWLSDIIQISPSATFQLDGALGKRQIITGNPSTVQHILKNQFSNYQKGTSFTTTLSDFLGTGIFNTDGQNWKFQRQVASHEFNTKSIRNFVEHIVDTELTSRLIPILYLSTQTNQILDFQDILQRFTFDNICKIAFGFDPEYLTPSTNRTRFALAYEDAMEISCKRFRLPLPIIWKIKRYFNIGSEKRLKEAVTEVREFAKNIVREKKRELEETSSLQTEDMLSRFLSSGHSEEEFVTDMVISFILAGKDTTSGALTWFFWLLWKNPRVEEEIVKEVSKKSESLVYDEVKEMVYTHAALSESMRLYPPVPMDTKEAVKDDVLPDGRFVKKGTMVTYHVYAMGRMKSLWGDDWAEFRPERWLERDVVNGKWVFVGRDLYSYPVFQAGPRVCLGKEMAFMQMKRIVAGIVGKFKVVPEGNKDEHPGFISFLTSQMEGGFPVTIQKKFP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02649 500 Pfam Cytochrome P450 34 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 SUPERFAMILY Cytochrome P450 28 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 CDD CYP86A 68 491 - -
Vifa5g02649 500 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02649 500 PANTHER CYTOCHROME P450 23 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02649 Vifa-Chr5 880800548 880802050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02649 7 498 Cytochrome P450 AT5G63450 46.322 5.66e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02649 K20769 K13407 ag:AAD10204 859.751