Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02635 ATGACGAATCAAGTTCTACAACTATATCCGAATGTCTTCACACGTTTTGCAGGAAGTGCATTTATGACAAAATTTCTGATGAGGATTTGGAATGCTGTCCAGAATGCAAACATTGATTTGGGCTGTGTTCCACTTGAGAAACTAAGGCCGGACCACACTAAGCAAGATGTAAGGGCCAAGATTTTCCCCTTAAAGGGAAGAAAGGTGAAAGAACCTGAAGTTGTTGCGGCTTCAGTACCATTGCCAGCTAAAAGAAAAGAAAGATCTTTGTCGTCTTTGGTGGTCAACACACCAAGGGTATCGGCACAATCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCTAGCAGTCTGCGGTCCTCTAGTTTTTCATTTGAAAGATTGATTAAAAAAGAGGAAGCATTATTGGACGACCGTCCCGAGAGTTCAAGCTCACCTGAAACTTCAAATAAGTTGCGCCAGAACAATGGACAGAGCGAGGGTAGTCAATCCACGCCAAATAAAGAAACAGAGAATGGTGCTGAAACATATGATGCAAAGTTGGATCTTTGGAAACCGCTGAATTGTTTAGTGGAAGTCGCAAGCAGGACTAAATCTTTCAAGTCTAATACACAAGTTTCTTCAGACACAGCAAAACCCAATAAATTGCGCAGAGTACGCAAGAAAAAGGAAACTTTTGGAGAATCAGGCATAACACCCCAAGCTGTGGTGGATTCTACCAGCAATAAACTCTTTATGAGTGGTCCAATTTGGTTCTGCTTAGTAGCTTCTGAAAACCAGGAAGGAGATGCACCCTTGCCACAAATTCCTGCTAGCTATCTGAGAATAAAGGATGGAAGCGTACCTGTCTCGTTTATCCAAAAATACCTAATGAAGAAACTAGATCTGATGAGTGAAACTGAGATTGAGATTAAATGGTCCTCAGCAAAGGATTTTGTCATGGTTCTAGCATATGCTCGGAAGACTCCACACCCTTGA 984 0.4187 MTNQVLQLYPNVFTRFAGSAFMTKFLMRIWNAVQNANIDLGCVPLEKLRPDHTKQDVRAKIFPLKGRKVKEPEVVAASVPLPAKRKERSLSSLVVNTPRVSAQSTMTGRRTKPTRKASSLRSSSFSFERLIKKEEALLDDRPESSSSPETSNKLRQNNGQSEGSQSTPNKETENGAETYDAKLDLWKPLNCLVEVASRTKSFKSNTQVSSDTAKPNKLRRVRKKKETFGESGITPQAVVDSTSNKLFMSGPIWFCLVASENQEGDAPLPQIPASYLRIKDGSVPVSFIQKYLMKKLDLMSETEIEIKWSSAKDFVMVLAYARKTPHP 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02635 327 MobiDBLite consensus disorder prediction 90 122 - -
Vifa5g02635 327 MobiDBLite consensus disorder prediction 136 174 - -
Vifa5g02635 327 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 37 307 IPR044807 GO:0004842
Vifa5g02635 327 MobiDBLite consensus disorder prediction 143 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02635 Vifa-Chr5 876386175 876390090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02635 36 279 C3H Transcription Factor Family AT2G30580 46.263 9.05e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02635 K16277 - gmx:100815540 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02635 5 876386175 876390090 Vifa5g02635 5 876386175 876390090 ECH
Vifa5g02635 5 876386175 876390090 Vifa3g01369 3 353043496 353045993 PCT