Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02617 ATGGAAATAACATTCAACTCAACGACGGCAAGAGTTCCTTCTTTGCCGGTAATAAAATCAGACGCTCGCGATCGGAGCCCGTGCTCACTTTCCATCGTTCTGCGTAACCAATTCGTGCAGCTTTCATCTTCTCCAACACGCTTTCGCATTAACAAGATTTCTCTCTTCAAGGTTTTATCTGCTCAGAACAATAATGTTCAAGTTGTAGAAGGAAGTGGTGTTGATGAGATCTATGATGCATTGGTTAATCGAATTCTGTATCTTCCGTCAGTGTCGTTAAGTCCTAATTATAAGTTTTTTGTTGGCCTGGCTGGTCCTCCTGGTTCCGGGAAAAGCACAATAGCGCATGAAGTAGCCAGACGCATAAACAAGCTTTGGCCAGAGAAAGCTTCTTCTTTTGACTCCAAGGTTCAACCTTCTGAAGTCGCTGCTGTGATTCCCATGGATGGTTTTCATCTTTATCGTTCTGAACTAGATGCAATGAAGAATCCCGAGGAAGCACATGCCAGAAGGGGAGCTCCATGGACATTCAATCCTACGCGTCTTCTTACGTGTCTCAAGAATCTAAGACTTCATGGATCAGTTTCTGTACCATCATTTGATCATGGTGTTGGGGATCCAGTGGAAGATGATATCTTTGTGAACCTTCAGCATAAAATCATTATTATAGAAGGTAACTATTTGCTCCTGGAAGATGGGGTATGGAAGGATATTTCATCTTTGTTTGATGAGAAATGGTTTATTGATATTGACATTGACAAAGCAATGCAGCGAGTTTTAAAGAGACATATCTCTACTGGCAAGCCTCGAGACATTGCTAAGCAGAGGATAGAGAACAACGACAGACTCAATGCAGAACTTATAATGAAGTGTAAGAAAAATGCTGATATAATAATCAAGTCCGTTGATTTTTGA 915 0.412 MEITFNSTTARVPSLPVIKSDARDRSPCSLSIVLRNQFVQLSSSPTRFRINKISLFKVLSAQNNNVQVVEGSGVDEIYDALVNRILYLPSVSLSPNYKFFVGLAGPPGSGKSTIAHEVARRINKLWPEKASSFDSKVQPSEVAAVIPMDGFHLYRSELDAMKNPEEAHARRGAPWTFNPTRLLTCLKNLRLHGSVSVPSFDHGVGDPVEDDIFVNLQHKIIIIEGNYLLLEDGVWKDISSLFDEKWFIDIDIDKAMQRVLKRHISTGKPRDIAKQRIENNDRLNAELIMKCKKNADIIIKSVDF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02617 304 PANTHER URIDINE KINASE 74 298 - -
Vifa5g02617 304 Pfam Phosphoribulokinase / Uridine kinase family 101 302 IPR006083 GO:0005524|GO:0016301
Vifa5g02617 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 302 IPR027417 -
Vifa5g02617 304 Gene3D - 80 302 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02617 99 299 PRT Gene Family AT1G55810 25.481 6.23e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02617 - - gmx:100798850 468.003