Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02582 ATGGGTAATGGTGACTATGTTTCCTACCCTTCGGGTATGAACATTGAGAGTGTTCACCGTGTGGCTATTCCGCCGCCGCAACCGTTTTTGGAGTCTCTGAAATATTCTATGAAGGAGACTTTATTCCCGGATGATCCATTGAGGAAGTTCAAGAATCAACCAGGTTTGAAGAAGTTTGTGCTGGGTCTTCAACACTTTCTGCCCATTTTGGAGTGGGGTCCAAAATATACTCTTGGATACTTGAAATCCGATCTTATTGCTGGGATCACCATTGCTAGTTTGGCTATTCCTCAAGGGATTAGTTATGCTAAGCTTGCCAATCTTCCTCCGATTCTCGGACTTTATTCAAGCTTTATACCACCTTTGATTTACGCGATGATGGGTAGCTCCAGGGATTTGGCGGTCGGAACTGTCGCTGTTGGATCACTTCTCATGGCGTCCATGTTGAGCCGTGAAGCTAGTCCAACCGAGAATCCAACGCTTTTTCTTCATCTTGCTTTCACTGCCACATTCTTTGCTGGTCTTCTACAATTATCACTCGGCCTCTTTAGGTTAGGGTTTATTGTGGATTTTCTATCACATGCAGCAATAGTAGGGTTCATGGGAGGAGCAGCCACAGTAGTTTGTCTACAACAGCTAAAATCGATTTTAGGACTTGAAAAATTCACACATAAAGCTGATATTGTGTCAGTTATGAACTCTGTTTTCAGCCAAACTCACGAGTGGAGGTGGGAAAGTGCAGTGTTAGGATGTTGCTTTATTTTCTTCCTCCTTGTTACAAGATACTTCAGCAAACGACAACCAAGGTTCTTTTGGGTGTCAGCCATGGCACCACTGACGTCGGTGATATTAGGAAGTATATTGGTTTATCTAACTCACGCTGAGAAGCACGGCGTTGAAGTGATAGGAAACTTGAAGAAGGGGCTAAATCCACCTTCAGCAACAGACTTAGTGTTTGTGTCACCTTATATGGGCACAGCCATCAAAACTGGACTCATTACTGGTATAATAGCTCTTGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTTCAAAAATTACCATATCGATGGTAACAAAGAAATGATAGCTATTGGTACCATGAATATTTTTGGTTCACTAACCTCTTGCTACCTCACAACAGGCCCGTTTTCGCGGTCGGCTGTGAATTACAATGCTGGTTGCAAAACAGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTGACGTTATTATTCCTAACACCTTTGTTCCATTACACTCCTCTAGTGGTGTTATCTGCCATAATTGTATCTGCAATGCTTGGACTCATAGATTATCAAGCAGCAATACATTTGTGGAAAATTGATAAATTTGATTTTCTAGTATGCTTCAGCGCATATTTTGGAGTTGTTTTTGGTAGTGTTGAAATTGGCTTAGTACTAGCCGTTGCAATATCTGTACTTAGAGTACTTTTATTTGTGGCAAGGCCTAGAACATTTGTTTTAGGAAACATTCCGAATTCATCGGCATACAGAAACGTAGAACATTATCCAAATGCAGATCATGTTCCTGGGGTACTAATTCTTGAAATTGATGCCCCGATTTACTTTGCGAATGCTAGCTATTTAAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGAGAAAATCAAAGGTGCAGGAAGTACTAGTTTGCAGTATGTTATAGTGGATATGACAGCTGTTGCGAACATTGATACGAGTGGAATAAGCATGCTTGAAGAGTTCAAGAAGACGGTAGACAGAAAAGGACTACAACTTGTTTTGGTCAATCCCGGAAGCGAGGTGACGAAGAAGCTGAACAAATCAAAGTTCCTAGATGAAATAGGACATAAATGGGTTTATGTGACAGTTGAAGAGGCTGTTGGAGTATGCAGCAGCTTCATGCTTCATACACAAAAGGCTAACCCCATGAAAGATGAAACAGAAGGTTTGGATAGTGTGTGA 1977 0.4153 MGNGDYVSYPSGMNIESVHRVAIPPPQPFLESLKYSMKETLFPDDPLRKFKNQPGLKKFVLGLQHFLPILEWGPKYTLGYLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLSREASPTENPTLFLHLAFTATFFAGLLQLSLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEKFTHKADIVSVMNSVFSQTHEWRWESAVLGCCFIFFLLVTRYFSKRQPRFFWVSAMAPLTSVILGSILVYLTHAEKHGVEVIGNLKKGLNPPSATDLVFVSPYMGTAIKTGLITGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSLTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFLVCFSAYFGVVFGSVEIGLVLAVAISVLRVLLFVARPRTFVLGNIPNSSAYRNVEHYPNADHVPGVLILEIDAPIYFANASYLRERITRWIDEEEEKIKGAGSTSLQYVIVDMTAVANIDTSGISMLEEFKKTVDRKGLQLVLVNPGSEVTKKLNKSKFLDEIGHKWVYVTVEEAVGVCSSFMLHTQKANPMKDETEGLDSV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02582 658 SUPERFAMILY SpoIIaa-like 514 635 IPR036513 -
Vifa5g02582 658 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vifa5g02582 658 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Vifa5g02582 658 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Vifa5g02582 658 PANTHER SULFATE TRANSPORTER 31 639 IPR001902 GO:0016020|GO:0055085
Vifa5g02582 658 Gene3D STAS domain 492 637 IPR036513 -
Vifa5g02582 658 Pfam Sulfate permease family 81 461 IPR011547 GO:0016020
Vifa5g02582 658 NCBIfam sulfate permease 68 631 IPR001902 GO:0016020|GO:0055085
Vifa5g02582 658 Pfam STAS domain 513 631 IPR002645 -
Vifa5g02582 658 FunFam Sulfate transporter 31 492 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02582 Vifa-Chr5 859982736 859987821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02582 19 646 Inorganic Solute Cotransporters AT4G02700 68.362 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02582 K17471 - gmx:100791091 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02582 5 859982736 859987821 Vifa5g02582 5 859982736 859987821 ECH