LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa5g02572	ATGTTAACTCTGAAAGGAGGAAGCAGACCACCATGGGTAGGTTTAGGAGCATCAGTTTGGGTTCAAATAGCATCAGGAAACACCTTTACTTTTCCTCTATACTCACACTCTTTGAAATCTGTTTTGGGTTTCAATCAAAGGCAAGTTACACTTCTTGGTGTTGCTAATGATATTGGTGAAAACGTTGGTTTGCTTCCTGGTATCGCTTGCAATACGTTTCCGCCTTGGCTTATACTCTCTGTTGGTGCTTTTGCTTCTTTTCTTGGCTATGGTATTCTCTGGCTTGCTGTTAGCCAAACAGTTACCAATCTTCCTTATTTGCTGGTCAGTGTGTATGGTTCTGCTGCATATGTCTCCCAATCAACATGGATACAATCAGGAACTATAGAAGAAAATATACTCTTTGGAAGTATAAAAGACAAAGCAAAAGCTATAGTAACACTTTTAGATCAGAGTGTAGGATCATGCCTTTTATTAGCATTTGGGTATACTTTGCTCCAGGATCCATTCAGCTGGAGAAACATAATGGGTATTCTGTTAGCCATGGTTGGGATGATTCTATATTCTTACTATTGTAAAATGTACTGGACATGTATCAGACAGAGGACTGTAAAATTTCTGGAGTGTTTGGTACTTAACTCTGTCCAAAACCTATTGGAATATTGA	666	0.3874	MLTLKGGSRPPWVGLGASVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNTFPPWLILSVGAFASFLGYGILWLAVSQTVTNLPYLLVSVYGSAAYVSQSTWIQSGTIEENILFGSIKDKAKAIVTLLDQSVGSCLLLAFGYTLLQDPFSWRNIMGILLAMVGMILYSYYCKMYWTCIRQRTVKFLECLVLNSVQNLLEY	221

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa5g02572	221	Pfam	Nodulin-like	11	128	IPR010658	-
	Vifa5g02572	221	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	12	155	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa5g02572	Vifa-Chr5	856004256	856005021	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa5g02572	2	133	Nodulin-like Gene Family	AT1G80530	56.061	9.96e-42	147

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa5g02572	-		-	psat:127131405	204.912