Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02480 ATGTTACCTAGAAATCATCAAAATCTAAAACCAGAATTAGGAAGAAGATACTTTATATTAAGAAGCCAGTTAACCATGAATTGCTCTACTCTTTATTCCATTTTAGCAGTGCTGATCCTTCTTAATCCATCAAATGCTCAATTAATTTCAACCTTCTACTCCAACACATGCCCAAATGTTTCTTCCATTGTGAGAAATGTTGTTCAACAAGCTCTGCAAAATGATTCTCGTATCGGCGCGAGCCTAATCCGTCTTCACTTTCATGATTGCTTTGTTAATGGTTGTGATGCATCTCTTTTGTTAGATCAAGGTGGCAACATAACATTGAGTGAGAAAAATGCTGCTCCCAACAATAATTCAGCTCGTGGATTTAACGTTGTTGACAACATCAAAACCTCAGCTGAAAAATCATGTCCTTCTGTCGTGTCTTGTGCTGATATTCTTGCTCTCGCTTCAGAAGCATCTGTGTTTTTGGCAGGAGGTCCTTCTTGGAAAGTGCTGCTCGGCCGAAGGGATGGCCTAATTGCAAACCAATCCGGCGCAAACACTTCCATCCCCGCTCCAACCGAAAGCTTAGCAAATATCACTGCCAAATTTACCGCGGTTGGCTTAAACACTAGTGATCTAGTCGCATTATCAGGCGCACATACATTTGGTCGTGCACAATGTAGATTTTTCAACCAGAGACTCTTCAACTTCAGCAACACTGGTAAACCCGATGCAACTCTAAATTCAACATATCTAGCTACTCTACAACAAAACTGTCCACAAAATGGAAACGGCAACACAATAAACAATCTGGACCCTTCATCGCCGAATAATTTCGACAACAACTACTTCAAGAATCTTCTCAACAACCGAGGCCTTCTTCAAACAGACCAAGAGTTGTTTTCTACTAATGGCGCTGCCACAATCTCCATTGTTAACATGTTTGCAAATAACCAAACAGCTTTTTTTGAAGCATTTGTTCAGTCCATGATTAAGATGGGTAATATTCGACCGTTGGTCGGAAATCGAGGTGAAATTAGATCTGATTGTAGGAAAGTAAATGGAAGTTGA 1059 0.4032 MLPRNHQNLKPELGRRYFILRSQLTMNCSTLYSILAVLILLNPSNAQLISTFYSNTCPNVSSIVRNVVQQALQNDSRIGASLIRLHFHDCFVNGCDASLLLDQGGNITLSEKNAAPNNNSARGFNVVDNIKTSAEKSCPSVVSCADILALASEASVFLAGGPSWKVLLGRRDGLIANQSGANTSIPAPTESLANITAKFTAVGLNTSDLVALSGAHTFGRAQCRFFNQRLFNFSNTGKPDATLNSTYLATLQQNCPQNGNGNTINNLDPSSPNNFDNNYFKNLLNNRGLLQTDQELFSTNGAATISIVNMFANNQTAFFEAFVQSMIKMGNIRPLVGNRGEIRSDCRKVNGS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02480 352 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601
Vifa5g02480 352 SUPERFAMILY Heme-dependent peroxidases 47 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 CDD secretory_peroxidase 47 349 IPR033905 GO:0004601|GO:0042744
Vifa5g02480 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 208 218 IPR019793 -
Vifa5g02480 352 FunFam Peroxidase 186 329 - -
Vifa5g02480 352 Gene3D - 52 350 - -
Vifa5g02480 352 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Haem peroxidase superfamily signature 142 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Haem peroxidase superfamily signature 160 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Haem peroxidase superfamily signature 208 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 141 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 160 175 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 207 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 122 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 FunFam Peroxidase 51 202 - -
Vifa5g02480 352 ProSiteProfiles Plant heme peroxidase family profile. 47 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 Gene3D Peroxidase, domain 2 186 329 - -
Vifa5g02480 352 PANTHER PEROXIDASE 72-RELATED 45 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa5g02480 352 Pfam Peroxidase 64 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02480 Vifa-Chr5 819892622 819894116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02480 28 352 Peroxidase AT5G06720 71.341 6.55e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02480 K00430 - gmx:100810355 538.88