Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02467 ATGGTTCTGTACATTCAAAATGTACCGAGTGCTTGCACAAGCAAAAACACTATTGACATGGTTGACGATATTGACATTAAAGATTTTCGTGATGATCCTTTAGGGTGGACAATGAAACTACTTAAGCATCCATTCCGTGAATTCTCGATGGCTGCGGTACAGGCAAATGAAGATATGGAAGATTTCATCCAGGTTGAGATTGGCAACGATGCACTTTTTGTTGGAATATATGATGGCCAAAATGGCGTCATTGCTTCCGAATATATGAGTAATAGCTTCTTCCCGGCTCTATTATGGATACTATATATCGCTAACGTTGGAGACTCCCATGCTGTAATGGGTTCTTTGGGTCCATTTGATATACTCCGTGTTTGGCAGTTGGGAGGCAGATGTATAGGAAATGCATATTTGAAGCGGGCACGTTTCACTTTAATGCCATCTTTCAAAGTACCGCGGACAGAACTCGCACCTTCTGATTTTACCCGACCCTTGCTATCAACAGAACCCAAGATATATTCAAGGGTCTTAAGAGACAACGATAAATTCATCATATTTGGATCTGGTGGACTTTGGAAATTACTGACAAATAAGGAAGCGGCTAAAATTGTTAACACCAATCCACGACAAGGAATTGCAAAAAGACTTGTGAGGATTGCTCTAGAGATTGCAGCTAGACAAAAGAATATAAGCTATAGTGAGCTTTTGAAGGTTTCTAAGGATCCAAGTGTTTCTGTTGAAAGAACAAGGCGGAGTTATCATGATGATATCTTTGTGACTGTTGTGTTTCTCGACAAAAAGCCAGATATAGATATGTCTGTGATGCCGAATGTGATCCCCTCAGTGCCAAGGATCAATTCCTTCAGAAGCTTCTATGACAAGGCTCTTTTTTCCAATTTTCGTTTTATGTATACTCGTGATCGTGAACCAATGGTTATTCATTCGACTTTAGCATCGGATGCTATTTTATATTGA 972 0.3981 MVLYIQNVPSACTSKNTIDMVDDIDIKDFRDDPLGWTMKLLKHPFREFSMAAVQANEDMEDFIQVEIGNDALFVGIYDGQNGVIASEYMSNSFFPALLWILYIANVGDSHAVMGSLGPFDILRVWQLGGRCIGNAYLKRARFTLMPSFKVPRTELAPSDFTRPLLSTEPKIYSRVLRDNDKFIIFGSGGLWKLLTNKEAAKIVNTNPRQGIAKRLVRIALEIAARQKNISYSELLKVSKDPSVSVERTRRSYHDDIFVTVVFLDKKPDIDMSVMPNVIPSVPRINSFRSFYDKALFSNFRFMYTRDREPMVIHSTLASDAILY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02467 323 ProSiteProfiles PPM-type phosphatase domain profile. 1 263 IPR001932 -
Vifa5g02467 323 PANTHER PROTEIN PHOSPHATASE 100 261 IPR015655 GO:0004722|GO:0006470
Vifa5g02467 323 SMART PP2C_4 37 261 IPR001932 -
Vifa5g02467 323 Pfam Protein phosphatase 2C 142 225 IPR001932 -
Vifa5g02467 323 Gene3D - 121 269 IPR036457 -
Vifa5g02467 323 Gene3D - 37 101 IPR036457 -
Vifa5g02467 323 SUPERFAMILY PP2C-like 49 265 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02467 Vifa-Chr5 817640128 817651835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02467 34 266 PP2C-type Phosphatase Gene Family AT5G06750 36.970 3.67e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02467 K01102 - tpra:123898969 236.113