LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa5g02456	ATGCCTCGATCACACATTGATCACATCATCAAGGTGAAACGCGAAAAGAACATTAGTAGGAGAGATCATAACAGCAATGGCGTCGAAAACAACGACGACGACTTTGCTCATCAAACTAGTAACGCCCGTCGAGCTCTTCGTTCTCGGTACCTCGCCGTCAAGAACATGATTCACGGTGATGAAATGGAGAATATTGCAAAGACTGACTCTGAAGTATTTGGTTCCATCTTCAATGAAATTGAGAACTTGCACCAATCAGTCACAACAACAAGAGACCAAGTAGCTGATGCACAGGCTCTTTTGGATGTAACCAAATCCTTGGTAGTGTCTGCAAAAGGTCATTCTAGTGGTGGACTCACTCCTTCAGCCTTTGTCACCCACATTATTGAAAAATTTGGAAAACGGGGTGGAACAAGTATTAGCAGAGAAGATTGCAACTCAATAGCTTGGAAGGATATTGGAGTTGCAGTTTCAAGTGTTTTTGGAGGGGGATATGGGTGTTCTACAATGAATGGCCCAATGGAATCAAAAATAAAACAGAAAAGGATTAATAGAAAAAAGCGTTTGAAGCCCACTGAATTGGCACGGCCAGAAGAGCTTGATGAAGGTTCAAGAGAAGAGAGAACTGATACTGATAAAACCATGTTAACTATGTTTAACATCTTAAGGAAGAATAAATCTGTCAAGCTTGAAAACTTGGTTTTGAATAAGAACTCTTTTGCTCAAACGGTAGAGAACTTATTTGCTCTATCTTTTTTAGTCAAAGATGGGCGTGCTGAAATTAAAGTAGACAAGGCTGGACGTCATCTAGTTTCGCCAAGGAATGCTCCCACTGCAAAATCAGTTGTTTCTAAGGATGTTGCTTTGAGCCACTTTGTGTTCCGACTTGACTATACTGATTGGAAGGTGATGGTTCGCTCTGTTGTTGGGGAGGAGTTGATGCCTCATAGGAATATTCAATCACAAACTTAG	972	0.4105	MPRSHIDHIIKVKREKNISRRDHNSNGVENNDDDFAHQTSNARRALRSRYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTRDQVADAQALLDVTKSLVVSAKGHSSGGLTPSAFVTHIIEKFGKRGGTSISREDCNSIAWKDIGVAVSSVFGGGYGCSTMNGPMESKIKQKRINRKKRLKPTELARPEELDEGSREERTDTDKTMLTMFNILRKNKSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPTAKSVVSKDVALSHFVFRLDYTDWKVMVRSVVGEELMPHRNIQSQT	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa5g02456	323	MobiDBLite	consensus disorder prediction	181	209	-	-
	Vifa5g02456	323	MobiDBLite	consensus disorder prediction	190	209	-	-
	Vifa5g02456	323	Pfam	Nse4 C-terminal	228	308	IPR014854	-
	Vifa5g02456	323	PANTHER	UNCHARACTERIZED	15	320	IPR027786	GO:0005634\|GO:0006281\|GO:0030915
	Vifa5g02456	323	MobiDBLite	consensus disorder prediction	14	37	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa5g02456	43	318	Non-SMC Element family	AT1G51130	53.929	3.59e-98	293

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa5g02456	K22825		-	gmx:100781485	383.259

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa5g02456	5	812954140	812957237	Vifa5g02456	5	812954140	812957237	ECH