Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02437 ATGGCAGGGACTGCTTTCTACACCTCCTGGTTGTGTTTTCAGCAATTTACTGATGAAGCTAAGGAACTTGTAGCAGTAAATGGGTTTAATGTTCTTGATGTTCGGGACAAATCTCAATTTGAGAGAGCTCATATTAAAACATGTTATCATGTTCCTCTTTTTGTTGAAAATACAGACAATGATCCCGGTACAATCTTGTTGAGGACTGTCCACAATAATTTTTCTGGGTTGTTCTTTGGGATACCATTCACTAGACCAAATCCTGATTTCTTAAAATCTGTCAAGAGTCAGATATCACCTGAAAGTAAACTGTTGGTTGTATGTCAGGAAGGAATGAGGTCTGCTGCAGCAGCAAATAAGTTAGATGAAGCTGGTTACCAAAATATAGCATGCATATCATCTGGACTTCAAACTGTGAAACCAGGGACATTTGAATCGGTTGGTTCAACCGAGTTGGAGAATGCTGGCAAAGCTGGTTTGGTGCAAATCCAAGGAAAAATTTCAGCTGTGTTAGGAACTGTTCTTATTTGTGCGTATCTATTCATCACCTTCTTTCCTGATCAAGCAGAGAAGCTGATTCAACTGGTTCCTGGAGGCTAA 600 0.3983 MAGTAFYTSWLCFQQFTDEAKELVAVNGFNVLDVRDKSQFERAHIKTCYHVPLFVENTDNDPGTILLRTVHNNFSGLFFGIPFTRPNPDFLKSVKSQISPESKLLVVCQEGMRSAAAANKLDEAGYQNIACISSGLQTVKPGTFESVGSTELENAGKAGLVQIQGKISAVLGTVLICAYLFITFFPDQAEKLIQLVPGG 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02437 199 Pfam Rhodanese-like domain 18 137 IPR001763 -
Vifa5g02437 199 Gene3D - 14 145 IPR036873 -
Vifa5g02437 199 ProSiteProfiles Rhodanese domain profile. 25 148 IPR001763 -
Vifa5g02437 199 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 18 137 IPR036873 -
Vifa5g02437 199 CDD RHOD 19 140 - -
Vifa5g02437 199 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 17 197 IPR044615 -
Vifa5g02437 199 SMART rhod_4 15 145 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02437 Vifa-Chr5 805771910 805773095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02437 18 192 Sulfurtransferasese or Rhodanese AT2G42220 76.000 2.89e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02437 - - adu:107492903 311.612