Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02436 ATGGCAGGGACTGCTTTCTACACCTCCTGCAATTTAGTTTTAAAAACTCACAATACAAGGACCCTAGCAAGGAAACAACTACCTCAATGTCAAATAAGAAGGAACTTTAGAATAAAAGCAGAAGTGGAATTTGTAACAGCTGATGAAGCTAAGGAACTTGTAGCAGTAAATGGGTTTAATGTTCTTGATGTTCGGGACAAATCTCAATTTGAGAGAGCTCATATTAAAACATGTTATCATGTTCCTCTTTTTGTTGAAAATACAGACAATGATCCCGGTACAATCTTGTTGAGGACTGTCCACAATAATTTTTCTGGGTTGTTCTTTGGGATACCATTCACTAGACCAAATCCTGATTTCTTAAAATCTGTCAAGAGTCAGATATCACCTGAAAGTAAACTGTTGGTTGTATGTCAGGAAGGAATGAGGTCTGCTGCAGCAGCAAATAAGTTAGATGAAGCTGGTTACCAAAATATAGCATGCATATCATCTGGACTTCAAACTGTGAAACCAGGGACATTTGAATCGGTTGGTTCAACCGAGTTGGAGAATGCTGGCAAAGCTGGTTTGGTGCAAATCCAAGGAAAAATTTCAGCTGTGTTAGGAACTGTTCTTATTTGTGCGTATCTATTCATCACCTTCTTTCCTGATCAAGCAGAGAAGCTGATTCAACTGGTTCCTGGAGGCTAA 690 0.3899 MAGTAFYTSCNLVLKTHNTRTLARKQLPQCQIRRNFRIKAEVEFVTADEAKELVAVNGFNVLDVRDKSQFERAHIKTCYHVPLFVENTDNDPGTILLRTVHNNFSGLFFGIPFTRPNPDFLKSVKSQISPESKLLVVCQEGMRSAAAANKLDEAGYQNIACISSGLQTVKPGTFESVGSTELENAGKAGLVQIQGKISAVLGTVLICAYLFITFFPDQAEKLIQLVPGG 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02436 229 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 10 227 IPR044615 -
Vifa5g02436 229 Pfam Rhodanese-like domain 46 167 IPR001763 -
Vifa5g02436 229 Gene3D - 31 174 IPR036873 -
Vifa5g02436 229 ProSiteProfiles Rhodanese domain profile. 55 178 IPR001763 -
Vifa5g02436 229 SMART rhod_4 45 175 IPR001763 -
Vifa5g02436 229 CDD RHOD 49 170 - -
Vifa5g02436 229 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 40 167 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02436 Vifa-Chr5 805771910 805773095 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02436 4 222 Sulfurtransferasese or Rhodanese AT2G42220 67.727 6.58e-110 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02436 - - vum:124827221 346.665