Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02425 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGTCAAATTATCAAAATCCTAATCCTCAAAATTCTCAATTTCCATCTGTGCCAACAAACCCCGCCATATTTTTTTCCAGAAACACCGATTGGGTTTATGTCCGGATGTCAAGTTCCACCAGTTTCTACTCAAGTTGTGGGACATCGGAGAATGATATCATGGTTGCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCATCAATAGAAAGACTAGCTCAATGTAAGGAGGACGAGCTAGAACTAAAGGCAATGAATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAAATATGGAATGTAG 654 0.367 MDPNHFHYQQAMFNYMSNYQNPNPQNSQFPSVPTNPAIFFSRNTDWVYVRMSSSTSFYSSCGTSENDIMVAAHAFFAQDEGTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPSSYEFNSSSPMERPMGQKAAKRKGKAKEIPNAMQDARIKRAASIERLAQCKEDELELKAMNIIMKDTSTMNDNQRDIHEKYCNKMKKKYGM 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02425 217 Pfam No apical meristem-associated C-terminal domain 83 202 IPR029466 -
Vifa5g02425 217 PANTHER - 62 214 - -
Vifa5g02425 217 MobiDBLite consensus disorder prediction 142 158 - -
Vifa5g02425 217 MobiDBLite consensus disorder prediction 104 158 - -
Vifa5g02425 217 MobiDBLite consensus disorder prediction 104 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02425 Vifa-Chr5 801488732 801489678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02425 60 180 Glutathione S-transferase Gene Family AT5G41240 27.907 1.06e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02425 - - psat:127095392 234.187