Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02384 ATGGCTACAATGCTACGGATGTATGCAACATGTCAACAACTTCAAGCCCAGGCCCAAGCTCATGCAGCAGCAGCCAGTGGTCTTCTTGGCCATACAGAATTACGGTTGCATATGCCTCCATCGATAGCACTTGCAAGCCGAGGGCGTCTACAGGGTCTCAGACTTCAGTTAGCACTTCTTGATCGGGAGTTTAATGATCTAGATTATGAAACTTTAAGAGCTCTGGATTCGGATAATATTTCTACTGCACCTTCTATGACTGAAGAAGAGATAAACGCTCTTCCAGTTCACAAACACAAGGTTTCTGTTCTCCAAAAAAGTAGTTCTTCAATGCCACAAGCACCGCCATCATCTTCTGCTGAGAAAACACAGGATAATTCAAATGCGGTTGGAAACACAAAAGCCTCGGATGATGAGCTCACCTGCAGTTTTCATGCTAATTGCATTGATCCTTGGTTGCGGCAACAAGGAACGTTCCCTGTTTGTAAATTCCGAGCAGGATCTGGGTGGAATGACGGTGGGCATGATGATATCACAGACATGGTATGA 549 0.4517 MATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALASRGRLQGLRLQLALLDREFNDLDYETLRALDSDNISTAPSMTEEEINALPVHKHKVSVLQKSSSSMPQAPPSSSAEKTQDNSNAVGNTKASDDELTCSFHANCIDPWLRQQGTFPVCKFRAGSGWNDGGHDDITDMV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02384 182 PANTHER TARGET OF ERK KINASE MPK-1 1 168 - -
Vifa5g02384 182 MobiDBLite consensus disorder prediction 102 135 - -
Vifa5g02384 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 168 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02384 Vifa-Chr5 783319871 783320479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02384 1 182 C3H Transcription Factor Family AT3G55530 66.667 2.10e-75 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02384 K16283 - gmx:100777936 259.61