Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02370 ATGTTTCAACTTGAAGACCTTCTTCCATATCTCTTACCCATTCTCTTGTTAATCCTTCCCATACTACTCTTCTTCTCAACAAAACCAAACAAGAAACAAAAACCACTTTCTTCATCTTCAATCAACAACAACATCACCATCCCAAAATCATACCCTCTTATTGGTTCCTACTTATCTTTCAAAAAAAACCTACACCGCCGTATCCAATGGCTCTCCGACATCGTCCGAATCTCCCCCTCCGCCACTTTCCAGCTCAACGGCACCTTAGGCAAACGCCAAATCATCACCGGAAACCCATCCACAGTCCAACACATTCTTAAAAACCAATTCTCTAACTACCAAAAAGGCACATCCTTCACAAACACCCTCTCCGATTTCCTAGGAACCGGAATCTTCAACACCGACGGCCAAAACTGGAAGTTTCAAAGACAAGTCGCAAGCCACGAATTCAACACCAAATCAATCCGTAACTTCGTTGAACACATAGTCGACACTGAACTCACCAACCGTTTAATCCCAATCCTCACTTCATCAACCCAAACAAACAATATCCTCGACTTCCAAGACATCCTCCAACGTTTCACTTTCGACAACATCTGCAACATCGCTTTTGGTTACGACCCAGAGTATCTAACACCCTCAACCAACAGATCGAAATTCGCAGAAGCATACCAAGACGCAACGGAAATAAGCAGTAAACGTTTCCGTTTACCGTTACCAATCATATGGAAAATAAAAAAATACTTCAACATAGGTTCGGAGAAGCGTCTCAAAGAAGCAGTAACAGAAGTACGAGGTTTCGCGAAAAATCTAGTACGAGAAAAGAAACGAGAACTAGAAGAGAAATCATCGCTTGAAACAGAAGATATGTTATCACGGTTCTTAAGTTCGGGCCATTCAGATGAAGATTTTGTTGCTGATATTGTAATAAGTTTTATTTTAGCAGGTAAAGATACAACTTCAGCTGCATTAACGTGGTTTTTCTGGCTGTTATGGAAGAATCCGCGCGTTGAGGAAGAGATTGTGAAGGAAGTGAGTGAGAAATCTAAGTCATTGGTTTATGATGAAGTGAAGGAAATGGTTTATACTCACGCTGCATTGAGCGAGAGTATGAGACTGTATCCGCCTGTACCGATGGATAGTAAGGAGGCGATAAATGACGATGTTTTGCCCGACGGGAGGCTTGTGAAGAAAGGGACAATTGTGACTTATCATGTTTATGCAATGGGGAGGATGAAGAGCTTGTGGGGTGATGATTGGGCTGAGTTTAGGCCGGAGAGGTGGTTGGAGAAAGATGAGGTGAATGGGAAGTGGGTTTTTGTGGGGAGAGATTCGTATTCTTATCCGGTTTTTCAGGCTGGGCCTAGGATTTGTTTGGGGAAGGAAATGGCTTTTATGCAAATGAAGAGGATTGTTGCGGGGATTGTTGGAAAGTTTAAGGTTGTTCCTGAGGCGCATTTGGCTGAAGAACCCGGGTTTATTTCTTTTTTGAGTTCCCAAATGGAAGGTGGGTTTCCTGTCACGATTCAGAAGAGGGATTCTTGA 1545 0.4278 MFQLEDLLPYLLPILLLILPILLFFSTKPNKKQKPLSSSSINNNITIPKSYPLIGSYLSFKKNLHRRIQWLSDIVRISPSATFQLNGTLGKRQIITGNPSTVQHILKNQFSNYQKGTSFTNTLSDFLGTGIFNTDGQNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSSTQTNNILDFQDILQRFTFDNICNIAFGYDPEYLTPSTNRSKFAEAYQDATEISSKRFRLPLPIIWKIKKYFNIGSEKRLKEAVTEVRGFAKNLVREKKRELEEKSSLETEDMLSRFLSSGHSDEDFVADIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVKEVSEKSKSLVYDEVKEMVYTHAALSESMRLYPPVPMDSKEAINDDVLPDGRLVKKGTIVTYHVYAMGRMKSLWGDDWAEFRPERWLEKDEVNGKWVFVGRDSYSYPVFQAGPRICLGKEMAFMQMKRIVAGIVGKFKVVPEAHLAEEPGFISFLSSQMEGGFPVTIQKRDS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02370 514 Coils Coil 268 288 - -
Vifa5g02370 514 Gene3D Cytochrome P450 35 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 SUPERFAMILY Cytochrome P450 43 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 CDD CYP86A 82 505 - -
Vifa5g02370 514 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PANTHER CYTOCHROME P450 36 507 - -
Vifa5g02370 514 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02370 514 Pfam Cytochrome P450 48 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02370 Vifa-Chr5 779145593 779147137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02370 5 513 Cytochrome P450 AT5G63450 46.602 9.60e-161 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02370 K20769 K13407 ag:AAD10204 915.22