Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02359 ATGTCTCCGGTAATCAAAAAATTTCTATTGCTATGTGTGTTGGCGGTTCTATCAGTGAACAATGTTCTTGGAAAAGTGCATGTGAAAATTACAAACTCTTTAATAAATAAATTGGATTTAACCATTCATTGCAAATCTAAAGATGATGATTTGGGTGTGCATCTTCTTCATCCTAATGAGAGTTTTAGTTTTCAGTTTAAACGTAAATTTTTTGGAGGAACATTATTCTATTGTTCATTTCAATGGAATAATGAACTTCGTTGGTTTGATATATACAAACAAACAAGAGATGTTCAGGGAGGTGATGATTTCAATTGGTCTATAAAAGAATCCGGACCATGTGTGACTATTGTATACTCGACTGAACCTTTTTGCTTTCCTTGGAATCCGAAATTATTAATGTAA 405 0.321 MSPVIKKFLLLCVLAVLSVNNVLGKVHVKITNSLINKLDLTIHCKSKDDDLGVHLLHPNESFSFQFKRKFFGGTLFYCSFQWNNELRWFDIYKQTRDVQGGDDFNWSIKESGPCVTIVYSTEPFCFPWNPKLLM 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02359 134 PANTHER - 24 116 IPR010264 -
Vifa5g02359 134 Pfam Plant self-incompatibility protein S1 27 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02359 Vifa-Chr5 774286134 774286538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02359 25 133 Carbohydrate Esterase AT3G16970 44.737 3.56e-26 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02359 - - cam:101513244 137.117