Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02358 ATGTCTCCGGTAACCAAAAAATTTCTATTGCTATGTGTGTTGGCGGTTCTATCAGTGAACAATGTTCTTGGAAAAGTACATGTGAAAATTACAAACTCTTTGACAAATAAATTGGATTTAACCATTCATTGCAAATCTAAAGATGATGATTTGGGTGTGCATCTTCTTCCTCCTAATGAAAGTTTTAGTTTTCAGTTTAAACGTAAATTTTTTGGAGGAACATTATTCTATTGTTCATTTCAATGGAATAATGAACTTTATCGGTTTGATATATACAAACAAACAAGAGATGTTCAGGCAGGTGATGATTTCAATTGGTCTATAAAAGAATCCGGACCATGTGTGACTATTGTATACTCGACTCAACCTTTTTGCCATCCTTGGAATCCAAAATTATTAATGTAA 405 0.3235 MSPVTKKFLLLCVLAVLSVNNVLGKVHVKITNSLTNKLDLTIHCKSKDDDLGVHLLPPNESFSFQFKRKFFGGTLFYCSFQWNNELYRFDIYKQTRDVQAGDDFNWSIKESGPCVTIVYSTQPFCHPWNPKLLM 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02358 134 PANTHER - 24 116 IPR010264 -
Vifa5g02358 134 Pfam Plant self-incompatibility protein S1 27 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02358 Vifa-Chr5 774103417 774103821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02358 25 133 Carbohydrate Esterase AT3G16970 42.982 9.50e-25 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02358 - - tpra:123904838 132.494