Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02312 ATGGAGAATTCCTCAATAAGTGGAGTTCATGATTTCAATATGGCTTCAAGAAAAGCTGGAGAAGCAGCATTGAGACGCTATGAGGCAACGCAATGGCTAGAAAGTCAAGTTGGTCCTCTCGGAATATCTAAGCAACCCTCGGAACGAGAACTTGTTTCTTGCTTGAGAAATGGTCTAATTCTTTGCAAGGCCATTAACAAGATTCATCCCGGAGCAATACCAAAGATAGTGGATAGTCAAGTACCAATACAATCACTTGCTTGGGATTCCCAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTCCGCAACTTTGTTAATGCTGCCGGAGAATTAAAGCTTACAGCTTTTGAAGCTTCTGATCTTGAAAAGGAAAGTGTAGAGAATGGATCAGCTGGAAAGATTGTTGATTGCATTCTATCACTGAAATGGTTTCATGAGTCGAAGCAGATGAACAATCAGAGTGGATCCAGCAAACGCTTGAAGTCTCCTTTAGTTATGCAATCAATTAGTAGAATGCAACAAAGAGCCGCAACTGCATTACCCTCTGAGGCTTGCAGGCGCTTGGATTTGTCTGCAACATCTGAAAAAAAGCCTCCTGCTGAGAGTAGTTTTCAAACTCGAGAAGCAGAAAATATGGAATCACTTGTCAAGATACTAGTCGACCGAATGCTTGATGCCAAAGAAAATGTCGATGGAAAGCTTGTTGCTTCTATTTGTAATGGAGACCTGGATCCAATAAACCTATTTAATCAGGTTTTGGCTAGTTGTTGTGGGGAACAGCCATCTACGAAGTTCCCTGAGTTGCCGTCGCTACTAAAGAATTTTATTAAAGAAGGGAATAGCTTACCAACTCATCTCACTACCAAAAGCACAGAATCAAATGCTTTCTTTGCACCTAAAAATTTCAAGTGTTCCAGATCTTGCCTCGGAAAGTGCACATGCAATCACAGGCTTCTCATAGAAATACAGAAAAAAGAACTTCGGGATCTTAAAGCTTTGAAGTTGAGAATTAAGAGTGAGTTTGAAGAGATGCAATCACAGGTTCAAAGGTTTTTCAATGATATAGGTAGTCAAGTAAATGAGATGTCAGCCAAAGCGGTTGGGTATCACAAAGTAGTGGAAGAGAACAGAAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATCAGAGTATACTGCCGAATCAGACCTGCGTTCAGTGCTGAATCCAAGAATGTGGTTGATTTCATCGGTGAAGACGGTTCTCTATTTATTTTAGATCCATCAAAAACATCAAAAGATGGAAGAAAATCTTTTCAGTTTAATAGGATTTTTGGTCCAACAGCTGGGCAAGATGAGGTTTATAGAGACACTCAACCATTAATTAGATCTGTGATGGACGGTTACAATGTCTGTATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTCATACCATGAGTGGTCCTTCAGGTGGAACATCCAAAGATATGGGGATTAACTATCTGGCTCTTAATGATTTATTTCATATGTCTAATGAAAGGGAGGCTACTATAAAGTACGACATTTATGTTCAAATGGTTGAGATTTATAATGAACAAGTAAGAGACCTACTTGCCGAAGACAAAACAGAAAACAAATATCCTTTACCATATACCTATTATTATTCATTAGAGATCCGAAGCTGCAACGACGATGGTTTAAGTCTCCCGGATGCTAGATTGCTGTCAGTGAAATCTACAACAGATGTTATGACCCTTATGAAATTTGGCGAGGTAAATCGCGCTGTTAGTTCTACTGCAATCAATAATAGGAGTAGTCGCTCCCACAGTGTACTTACTGTACATATTAATGGCAAAGATATTACTGGCAACTCCATTCGCAGTTGCCTTCATTTAATAGATTTGGCCGGAAGTGAAAGGGTGGACAAGTCTGAAGTCACGGGAGATAGACTAAAGGAAGCACAGTATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCATTAGCACAAAAGAATTCTCACATTCCTTACCGGAATAGCAAACTTACACTTCTTTTGCAAGATTCCTTAGGCGGACATGCTAAAACTTTGATGTTTGCGCACATGAGTCCCGAAACAGATTCTTTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGAGGGTTTCCACAGTGGAACTTGGGGCAGCCCGAGTAAATAAAGAAAGCAGTGAGGTTATGCAACTTAAAGCACAGGTTGAAAACCTTAAGACTCAATTGGCCAACAAGGAAAATTCAAGACCGATGTTCAATAGAACTAAAGAACCTCGGACTCCATTAGAAAAAACTCCACTGCGACCTCGAAGACTTAGTATTGAAAATTCTAGCATAACAAAGACTGACAAACCTGTGAAAGTTGAGGATAAAAGTGGAGCCAAGTCACCTTCTTACATTCCCCGTTCAAGAAGACTAAGCTTGGAAGGTCCAAGAAATATAAAAAAAGCATCTGCTGATGTAAGCAAAACTTTACAGTTTGAGCCAATGTCTCAACAGAAATATCATCCACAGCAAGATCCCGAAGCCGTAGCAAAGCTAAATGGTCGATTGAGCAATGAGAGTTCCACATCAGCGTTGCATGCTAAATTTCCTCCAAGTCCTTCTACAAACATCTATCCGAAGAGTTTGATAGAAGTTGATAATGTGGTCCAAATCCACCCTGTTAAACTACCTCAAACACCTGAATCAACACTGCTAGATAAAAATGATTCAAACAAAATTTTGCCAGGCGACCTTGGTGATTCCATAACAACAAAGGGGATAGGTAGCACGAGCGGAAAAGGGTCCCAGTTCAGAAGATCTCTGAGAACAATTGGGAAACTGATTAGTGGCCCTGATAAAAGAAGCCAACAAACTATGGTTGAAGTGAAGTCACCTACCAAGGGAGGCATTCATGTAAGTCAGATAAATTCGCCAGTAGCAACTAGTGAGAAGACAAAAAGGAGGCAATCTTTAACAGGAATTCCATCCGGGCCTAACAATAGGCGAAGATCCTCTCTTGGAGGGAAGCCAGACCCCGTAGCATATGATGAGAAGGAGAGAAATGCCAAAACGCCTCCTCATGTTCGTTCAGAAAGCAAGACTGCAAAAAGGTGGCAATAG 3135 0.4048 MENSSISGVHDFNMASRKAGEAALRRYEATQWLESQVGPLGISKQPSERELVSCLRNGLILCKAINKIHPGAIPKIVDSQVPIQSLAWDSQPLPAYQYFENVRNFVNAAGELKLTAFEASDLEKESVENGSAGKIVDCILSLKWFHESKQMNNQSGSSKRLKSPLVMQSISRMQQRAATALPSEACRRLDLSATSEKKPPAESSFQTREAENMESLVKILVDRMLDAKENVDGKLVASICNGDLDPINLFNQVLASCCGEQPSTKFPELPSLLKNFIKEGNSLPTHLTTKSTESNAFFAPKNFKCSRSCLGKCTCNHRLLIEIQKKELRDLKALKLRIKSEFEEMQSQVQRFFNDIGSQVNEMSAKAVGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPAFSAESKNVVDFIGEDGSLFILDPSKTSKDGRKSFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFHMSNEREATIKYDIYVQMVEIYNEQVRDLLAEDKTENKYPLPYTYYYSLEIRSCNDDGLSLPDARLLSVKSTTDVMTLMKFGEVNRAVSSTAINNRSSRSHSVLTVHINGKDITGNSIRSCLHLIDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHMSPETDSFGETVSTLKFAQRVSTVELGAARVNKESSEVMQLKAQVENLKTQLANKENSRPMFNRTKEPRTPLEKTPLRPRRLSIENSSITKTDKPVKVEDKSGAKSPSYIPRSRRLSLEGPRNIKKASADVSKTLQFEPMSQQKYHPQQDPEAVAKLNGRLSNESSTSALHAKFPPSPSTNIYPKSLIEVDNVVQIHPVKLPQTPESTLLDKNDSNKILPGDLGDSITTKGIGSTSGKGSQFRRSLRTIGKLISGPDKRSQQTMVEVKSPTKGGIHVSQINSPVATSEKTKRRQSLTGIPSGPNNRRRSSLGGKPDPVAYDEKERNAKTPPHVRSESKTAKRWQ 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02312 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 390 758 IPR027417 -
Vifa5g02312 1044 Gene3D Kinesin motor domain 332 726 IPR036961 -
Vifa5g02312 1044 Coils Coil 321 348 - -
Vifa5g02312 1044 MobiDBLite consensus disorder prediction 928 943 - -
Vifa5g02312 1044 Coils Coil 731 758 - -
Vifa5g02312 1044 PRINTS Kinesin heavy chain signature 595 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 PRINTS Kinesin heavy chain signature 625 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 PRINTS Kinesin heavy chain signature 463 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 PRINTS Kinesin heavy chain signature 674 695 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Vifa5g02312 1044 SMART ch_5 25 145 IPR001715 GO:0005515
Vifa5g02312 1044 FunFam Kinesin-like protein KIN-14A 332 726 - -
Vifa5g02312 1044 MobiDBLite consensus disorder prediction 760 780 - -
Vifa5g02312 1044 SMART kinesin_4 388 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 SUPERFAMILY Calponin-homology domain, CH-domain 26 155 IPR036872 -
Vifa5g02312 1044 Gene3D - 10 176 IPR036872 -
Vifa5g02312 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 920 IPR027640 GO:0003777|GO:0007018
Vifa5g02312 1044 MobiDBLite consensus disorder prediction 921 1044 - -
Vifa5g02312 1044 MobiDBLite consensus disorder prediction 1017 1044 - -
Vifa5g02312 1044 MobiDBLite consensus disorder prediction 955 1008 - -
Vifa5g02312 1044 Pfam Kinesin motor domain 396 723 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 MobiDBLite consensus disorder prediction 754 823 - -
Vifa5g02312 1044 ProSiteProfiles Kinesin motor domain profile. 390 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02312 1044 FunFam Kinesin-like protein KIN-14L 11 174 - -
Vifa5g02312 1044 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02312 Vifa-Chr5 758470174 758486994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02312 319 770 Calmodulin-binding Proteins AT5G65930 36.900 2.84e-70 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02312 K10406 - gmx:100812493 1399.03