Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02311 ATGGAGAATTCCTCAATAAGTGGAGTTCATGATTTCAATATGGCTTCAAGAAAAGCTGGAGAAGCAGCATTGAGACGCTATGAGGCAACGCAATGGCTAGAAAGTCAAGTTGGTCCTCTCGGAATATCTAAGCAACCCTCGGAACGAGAACTTGTTTCTTGCTTGAGAAATGGTCTAATTCTTTGCAAGGCCATTAACAAGATTCATCCCGGAGCAATACCAAAGATAGTGGATAGTCAAGTACCAATACAATCACTTGCTTGGGATTCCCAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTCCGCAACTTTGTTAATGCTGCCGGAGAATTAAAGCTTACAGCTTTTGAAGCTTCTGATCTTGAAAAGGAAAGTGTAGAGAATGGATCAGCTGGAAAGATTGTTGATTGCATTCTATCACTGAAATGGTTTCATGAGTCGAAGCAGATGAACAATCAGAGTGGATCCAGCAAACGCTTGAAGTCTCCTTTAGTTATGCAATCAATTAGTAGAATGCAACAAAGAGCCGCAACTGCATTACCCTCTGAGGCTTGCAGGCGCTTGGATTTGTCTGCAACATCTGAAAAAAAGCCTCCTGCTGAGAGTAGTTTTCAAACTCGAGAAGTTGCAGCAGAAAATATGGAATCACTTGTCAAGATACTAGTCGACCGAATGCTTGATGCCAAAGAAAATGTCGATGGAAAGCTTGTTGCTTCTATTTGTAATGGAGACCTGGATCCAATAAACCTATTTAATCAGGTTTTGGCTAGTTGTTGTGGGGAACAGCCATCTACGAAGTTCCCTGAGTTGCCGTCGCTACTAAAGAATTTTATTAAAGAAGGGAATAGCTTACCAACTCATCTCACTACCAAAAGCACAGAATCAAATGCTTTCTTTGCACCTAAAAATTTCAAGTGTTCCAGATCTTGCCTCGGAAAGTGCACATGCAATCACAGGCTTCTCATAGAAATACAGAAAAAAGAACTTCGGGATCTTAAAGCTTTGAAGTTGAGAATTAAGAGTGAGTTTGAAGAGATGCAATCACAGGTTCAAAGGTTTTTCAATGATATAGGTAGTCAAGTAAATGAGATGTCAGCCAAAGCGGTTGGGTATCACAAAGTAGTGGAAGAGAACAGAAAACTATACAACATGGTCCAAGATTTGAAAGGTAATATCAGAGTATACTGCCGAATCAGACCTGCGTTCAGTGCTGAATCCAAGAATGTGGTTGATTTCATCGGTGAAGACGGTTCTCTATTTATTTTAGATCCATCAAAAACATCAAAAGATGGAAGAAAATCTTTTCAGTTTAATAGGATTTTTGGTCCAACAGCTGGGCAAGATGAGGTTTATAGAGACACTCAACCATTAATTAGATCTGTGATGGACGGTTACAATGTCTGTATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTCATACCATGAGTGGTCCTTCAGGTGGAACATCCAAAGATATGGGGATTAACTATCTGGCTCTTAATGATTTATTTCATATGTCTAATGAAAGGGAGGCTACTATAAAGTACGACATTTATGTTCAAATGGTTGAGATTTATAATGAACAAGTAAGAGACCTACTTGCCGAAGACAAAACAGAAAACAAATATCCTTTACCATATACCTATTATTATTCATTAGAGATCCGAAGCTGCAACGACGATGGTTTAAGTCTCCCGGATGCTAGATTGCTGTCAGTGAAATCTACAACAGATGTTATGACCCTTATGAAATTTGGCGAGGTAAATCGCGCTGTTAGTTCTACTGCAATCAATAATAGGAGTAGTCGCTCCCACAGTGTACTTACTGTACATATTAATGGCAAAGATATTACTGGCAACTCCATTCGCAGTTGCCTTCATTTAATAGATTTGGCCGGAAGTGAAAGGGTGGACAAGTCTGAAGTCACGGGAGATAGACTAAAGGAAGCACAGTATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACAGCATTAGCACAAAAGAATTCTCACATTCCTTACCGGAATAGCAAACTTACACTTCTTTTGCAAGATTCCTTAGGCGGACATGCTAAAACTTTGATGTTTGCGCACATGAGTCCCGAAACAGATTCTTTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGAGGGTTTCCACAGTGGAACTTGGGGCAGCCCGAGTAAATAAAGAAAGCAGTGAGGTTATGCAACTTAAAGCACAGGTTGAAAACCTTAAGACTCAATTGGCCAACAAGGAAAATTCAAGACCGATGTTCAATAGAACTAAAGAACCTCGGACTCCATTAGAAAAAACTCCACTGCGACCTCGAAGACTTAGTATTGAAAATTCTAGCATAACAAAGACTGACAAACCTGTGAAAGTTGAGGATAAAAGTGGAGCCAAGTCACCTTCTTACATTCCCCGTTCAAGAAGACTAAGCTTGGAAGGTCCAAGAAATATAAAAAAAGCATCTGCTGATGTAAGCAAAACTTTACAGTTTGAGCCAATGTCTCAACAGAAATATCATCCACAGCAAGATCCCGAAGCCGTAGCAAAGCTAAATGGTCGATTGAGCAATGAGAGTTCCACATCAGCGTTGCATGCTAAATTTCCTCCAAGTCCTTCTACAAACATCTATCCGAAGAGTTTGATAGAAGTTGATAATGTGGTCCAAATCCACCCTGTTAAACTACCTCAAACACCTGAATCAACACTGCTAGATAAAAATGATTCAAACAAAATTTTGCCAGGCGACCTTGGTGATTCCATAACAACAAAGGGGATAGGTAGCACGAGCGGAAAAGGGTCCCAGTTCAGAAGATCTCTGAGAACAATTGGGAAACTGATTAGTGGCCCTGATAAAAGAAGCCAACAAACTATGGTTGAAGTGAAGTCACCTACCAAGGGAGGCATTCATGTAAGTCAGATAAATTCGCCAGTAGCAACTAGTGAGAAGACAAAAAGGAGGCAATCTTTAACAGGAATTCCATCCGGGCCTAACAATAGGCGAAGATCCTCTCTTGGAGGGAAGCCAGACCCCGTAGCATATGATGAGAAGGAGAGAAATGCCAAAACGCCTCCTCATGTTCGTTCAGAAAGCAAGACTGCAAAAAGGTGGCAATAG 3141 0.405 MENSSISGVHDFNMASRKAGEAALRRYEATQWLESQVGPLGISKQPSERELVSCLRNGLILCKAINKIHPGAIPKIVDSQVPIQSLAWDSQPLPAYQYFENVRNFVNAAGELKLTAFEASDLEKESVENGSAGKIVDCILSLKWFHESKQMNNQSGSSKRLKSPLVMQSISRMQQRAATALPSEACRRLDLSATSEKKPPAESSFQTREVAAENMESLVKILVDRMLDAKENVDGKLVASICNGDLDPINLFNQVLASCCGEQPSTKFPELPSLLKNFIKEGNSLPTHLTTKSTESNAFFAPKNFKCSRSCLGKCTCNHRLLIEIQKKELRDLKALKLRIKSEFEEMQSQVQRFFNDIGSQVNEMSAKAVGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPAFSAESKNVVDFIGEDGSLFILDPSKTSKDGRKSFQFNRIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFHMSNEREATIKYDIYVQMVEIYNEQVRDLLAEDKTENKYPLPYTYYYSLEIRSCNDDGLSLPDARLLSVKSTTDVMTLMKFGEVNRAVSSTAINNRSSRSHSVLTVHINGKDITGNSIRSCLHLIDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHMSPETDSFGETVSTLKFAQRVSTVELGAARVNKESSEVMQLKAQVENLKTQLANKENSRPMFNRTKEPRTPLEKTPLRPRRLSIENSSITKTDKPVKVEDKSGAKSPSYIPRSRRLSLEGPRNIKKASADVSKTLQFEPMSQQKYHPQQDPEAVAKLNGRLSNESSTSALHAKFPPSPSTNIYPKSLIEVDNVVQIHPVKLPQTPESTLLDKNDSNKILPGDLGDSITTKGIGSTSGKGSQFRRSLRTIGKLISGPDKRSQQTMVEVKSPTKGGIHVSQINSPVATSEKTKRRQSLTGIPSGPNNRRRSSLGGKPDPVAYDEKERNAKTPPHVRSESKTAKRWQ 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02311 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 760 IPR027417 -
Vifa5g02311 1046 Pfam Calponin homology (CH) domain 25 146 IPR001715 GO:0005515
Vifa5g02311 1046 FunFam Kinesin-like protein KIN-14A 334 728 - -
Vifa5g02311 1046 MobiDBLite consensus disorder prediction 923 1046 - -
Vifa5g02311 1046 MobiDBLite consensus disorder prediction 1019 1046 - -
Vifa5g02311 1046 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 PRINTS Kinesin heavy chain signature 597 614 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 PRINTS Kinesin heavy chain signature 627 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 922 IPR027640 GO:0003777|GO:0007018
Vifa5g02311 1046 MobiDBLite consensus disorder prediction 957 1010 - -
Vifa5g02311 1046 MobiDBLite consensus disorder prediction 756 825 - -
Vifa5g02311 1046 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Vifa5g02311 1046 Gene3D - 10 176 IPR036872 -
Vifa5g02311 1046 SMART ch_5 25 145 IPR001715 GO:0005515
Vifa5g02311 1046 SUPERFAMILY Calponin-homology domain, CH-domain 26 155 IPR036872 -
Vifa5g02311 1046 Gene3D Kinesin motor domain 334 728 IPR036961 -
Vifa5g02311 1046 ProSiteProfiles Kinesin motor domain profile. 392 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 Coils Coil 323 350 - -
Vifa5g02311 1046 SMART kinesin_4 390 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 MobiDBLite consensus disorder prediction 930 945 - -
Vifa5g02311 1046 Coils Coil 733 760 - -
Vifa5g02311 1046 Pfam Kinesin motor domain 398 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifa5g02311 1046 FunFam Kinesin-like protein KIN-14L 11 174 - -
Vifa5g02311 1046 MobiDBLite consensus disorder prediction 762 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02311 Vifa-Chr5 758470174 758486994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02311 321 772 Calmodulin-binding Proteins AT5G65930 36.900 3.06e-70 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02311 K10406 - gmx:100786642 1395.18