Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02219 ATGTCGTGGCAAAATTACGTCGATGATCACCTTCTCTGTGAAATCGAAGGTAACCATCTCACTCATGCAGCTCTCCTCGGTCAAGACGGCAGCGTTTGGGCTCAGAGCGCCAATTTCCCTCAGTTTAAGCCTGAGGAAATTACTGCTATCAATAATGATTTTGCTGAGCCTGGAACACTTGCTCCAACTGGATTACACATTGGTGGAACTAAATATATGGTGATTCAAGGTGAACCTGGAGCTGTTATTCGAGGGAAGAAGGGTCCTGGTGGTGTTACTTGCAACATGGTAGTTGAAAGGCTTGGTGATTATCTCGTTGAACAGGGTCTCTAA 333 0.4565 MSWQNYVDDHLLCEIEGNHLTHAALLGQDGSVWAQSANFPQFKPEEITAINNDFAEPGTLAPTGLHIGGTKYMVIQGEPGAVIRGKKGPGGVTCNMVVERLGDYLVEQGL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02219 110 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Vifa5g02219 110 Pfam Profilin 1 94 IPR005455 GO:0003779
Vifa5g02219 110 CDD PROF 2 109 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Plant profilin signature 84 99 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Vifa5g02219 110 Gene3D Dynein light chain 2a, cytoplasmic 2 95 - -
Vifa5g02219 110 SMART prof_2 1 110 IPR005455 GO:0003779
Vifa5g02219 110 SUPERFAMILY Profilin (actin-binding protein) 2 109 IPR036140 -
Vifa5g02219 110 PANTHER PROFILIN 1 94 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Vifa5g02219 110 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02219 Vifa-Chr5 736078984 736079380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02219 1 110 Cytoskeleton Gene Families AT4G29350 66.412 2.52e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02219 K05759 - gmx:100127411 207.223