Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02188 ATGGTAAAGTTTCTCTACAGCAACAACTTTTTTCTGATATCTACAAAACAAAAAAAAATAACGATAGATACAGTTGAATCAGGCAAATTGATATTACAAGAAAAACTTTGCAAAAAGAGGATATTTCTTGTGCTTGACAATGTTAAGGAATTGGACCAATTGAATGCTTTGTGCGGGAGTCTCAAATGTTTTGGTCAAGGAAGTAAAATAATCATCACAACAAAAGATCTACATGTACTTCACACTCATAAAGTTAGCTGTGTATATGAAATAGAAGCATTGGACCAATATGAATCTCTTCAACTTTTTAGTTGGCATGCCTTCAAGGAACCAAGTCCTATGAATGGTTTTGTTGATCTTTCTAGAGATTTTATTGAGTACTCCGGGGAAGTGCCACTAGTTCTTCAAGTTATCGCGTCCTTTTTGTTGACTAGGCGAAGCAAAATAGAGTGGAAGAGTGTATTGGAGAAACTCAAATGCATTCCCAAGGACAATGTAGCCGAGAAGCTGAGAATAAGTTATGATGGTTTAAGGGATAATGATATTAAAGAGATATTCCTTGATATTGCTGTTTTCTTTATTGGGATGGACCAGAAAGATGCAACTAAAATATTGAAAGACTCTGGTCATTTTGTAGATATTGGAATGAGTGTCCTTGTACAACAAAGCCTTGTAACTGTTGATCGGAATAAAAAGATTGGAATGCATGATTTGCTGGAAGACATGGCAAGTGAGATCATAAGGAGAAAGTCAGAGAGTGTAGCTAAGGTAAGATATCGTTTTTCTAGGTTCTAG 795 0.3547 MVKFLYSNNFFLISTKQKKITIDTVESGKLILQEKLCKKRIFLVLDNVKELDQLNALCGSLKCFGQGSKIIITTKDLHVLHTHKVSCVYEIEALDQYESLQLFSWHAFKEPSPMNGFVDLSRDFIEYSGEVPLVLQVIASFLLTRRSKIEWKSVLEKLKCIPKDNVAEKLRISYDGLRDNDIKEIFLDIAVFFIGMDQKDATKILKDSGHFVDIGMSVLVQQSLVTVDRNKKIGMHDLLEDMASEIIRRKSESVAKVRYRFSRF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02188 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 189 IPR027417 -
Vifa5g02188 264 Gene3D - 93 178 IPR042197 -
Vifa5g02188 264 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 251 IPR044974 GO:0006952
Vifa5g02188 264 Gene3D - 3 89 IPR027417 -
Vifa5g02188 264 Pfam NB-ARC domain 23 159 IPR002182 GO:0043531
Vifa5g02188 264 SUPERFAMILY "Winged helix" DNA-binding domain 166 252 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02188 Vifa-Chr5 727619519 727620313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02188 31 256 WRKY Transcription Factor Family AT5G45050 33.628 2.45e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02188 - - tpra:123891787 323.168