Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02160 ATGGGAAAATCCGAAGAAGAACAACACCTGCCACGTGGCGCCACCTCATCGGATCGACCGCAGAATGCGGAAACCGAGTGTCGGCGGTGTTGTTGTTCTCAGATTCAGAAACTCCTTGGGTTCAGATGCATTCTCGTTTTCCTCTTCTCTCTTGCTTTGTTCCTCTCTGCTTTGTTCTGGTTGCCGCCGTTTCTTCGCCTCGCAGATCACAAGAATCTCCACGATAATTCCAAATATAAAGGTCATGATATTGTTGCAAGCTTTATTGTTAAAAAGCCAGTCGCTGTGCTAGAAGATAACAAATTGCAGCTCGCAAGGGAAATTTTTGATGAGATAGAAGCTCCCTCTACTACAACAGTGAACATCTTGTCTCTAGACCCGTTACCTCAGCCAAACAGGACAAAAGTGGTATTTGCAGTTGATCCTGATGGTGGTGAATACTCAGAAACGTCTTCTGCCTCCATAAGTTTGATAAGATCATTATTTACATCCTTGGTAATACACCAATCGAATCTGCAGCTCACTTCATTCGGAGATCCCTTATTTTTTGAAGTGCTGAAATTCAAAGGAGGAATTACTATACAAAGAAATTTCAATGAGCTGACAAATCAGCTAAAGTCTGGATTACATTTGACATCCTATGAGAACTTGCAAGTCGTCTTATCAAACTCTGAAGGTTCAACAGTAGATGCTCCCACGATTATTCAATCCTCGGTTCTACTTGCGGTTGGGATTCCTCCATCCAAACAGAGGCTAAAGCAATTGGCGCAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACGGAATTTGGTAGGGTTAAGCAAGTCAGACTCTCAACCATCTTGCAGCACTCCCTTAACGGCAGTGATACTCGCTCCGCGAGATCACCTGCTCCTGCTCCTGTGCCTCATTCCTCACACCATCACCACCACCACCACCATCATCATCACCATCACCACCATCACGATACCCATCTAACTCCTGCAACTTCTCCTATACCTGCACCTGCACATAATCCTTGGGAGGGTGTAACTCCACCTGAAGTTGGTTCTCCCGCATCTACAAAAAGTGTACCTGCACCACCGAAAAGTTCTCAAGCTCATCCTCCTGATTGTCCATTTGAGCGTAGAAAAAGGTCTAGGCGTAGTGCTGTGAGAAATACTTATCTAACACCTGCCATTGCCCCTAGCATTGAACATCATCACCATGTTCCTATTTCATCACCAAAACCACAGGTTGAACCCCCTCCCCCTACACATACCTCTCATTCGGTACCTGCTTTGAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCTGAGCCCCCGCCTAAGAACGGACCTGCTGCAGAACAACCTAAGAACGGACCTGCTGCAGAACAACCTAAGAGCTCATCTTCTGCAGGTTGTCTTGGAACCGTTAAATGGACATCTTTAATATTTGTTGTACTTGTGTTACATGTGTGA 1470 0.4531 MGKSEEEQHLPRGATSSDRPQNAETECRRCCCSQIQKLLGFRCILVFLFSLALFLSALFWLPPFLRLADHKNLHDNSKYKGHDIVASFIVKKPVAVLEDNKLQLAREIFDEIEAPSTTTVNILSLDPLPQPNRTKVVFAVDPDGGEYSETSSASISLIRSLFTSLVIHQSNLQLTSFGDPLFFEVLKFKGGITIQRNFNELTNQLKSGLHLTSYENLQVVLSNSEGSTVDAPTIIQSSVLLAVGIPPSKQRLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSTILQHSLNGSDTRSARSPAPAPVPHSSHHHHHHHHHHHHHHHHDTHLTPATSPIPAPAHNPWEGVTPPEVGSPASTKSVPAPPKSSQAHPPDCPFERRKRSRRSAVRNTYLTPAIAPSIEHHHHVPISSPKPQVEPPPPTHTSHSVPALSPLPNVAFAHAEPPPKNGPAAEQPKNGPAAEQPKSSSSAGCLGTVKWTSLIFVVLVLHV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02160 489 MobiDBLite consensus disorder prediction 1 21 - -
Vifa5g02160 489 MobiDBLite consensus disorder prediction 288 469 - -
Vifa5g02160 489 PANTHER F20B24.21 194 482 - -
Vifa5g02160 489 MobiDBLite consensus disorder prediction 306 326 - -
Vifa5g02160 489 MobiDBLite consensus disorder prediction 411 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02160 Vifa-Chr5 717961501 717966317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02160 1 485 C3H Transcription Factor Family AT3G10810 41.923 1.44e-71 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02160 - - gmx:100792490 519.62