Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02159 ATGGGAAAATCCGAAGAAGAACAACACCTGCCACGTGGCGCCACCTCATCGGATCGACCGCAGAATGCGGAAACCGAGTGTCGGCGGTGTTGTTGTTCTCAGATTCAGAAACTCCTTGGGTTCAGATGCATTCTCGTTTTCCTCTTCTCTCTTGCTTTGTTCCTCTCTGCTTTGTTCTGGTTGCCGCCGTTTCTTCGCCTCGCAGATCACAAGAATCTCCACGATAATTCCAAATATAAAGGTCATGATATTGTTGCAAGCTTTATTGTTAAAAAGCCAGTCGCTGTGCTAGAAGATAACAAATTGCAGCTCGCAAGGGAAATTTTTGATGAGATAGAAGCTCCCTCTACTACAACAGTGAACATCTTGTCTCTAGACCCGTTACCTCAGCCAAACAGGACAAAAGTGGTATTTGCAGTTGATCCTGATGGTGGTGAATACTCAGAAACGTCTTCTGCCTCCATAAGTTTGATAAGATCATTATTTACATCCTTGAAAGTGCAAACAAAATTCAACTTTTCTTTGAATTTTCCCATTTATCAGATACAAAGAAATTTCAATGAGCTGACAAATCAGCTAAAGTCTGGATTACATTTGACATCCTATGAGAACTTGCAAGTCGTCTTATCAAACTCTGAAGGTTCAACAGTAGATGCTCCCACGATTATTCAATCCTCGGTTCTACTTGCGGTTGGGATTCCTCCATCCAAACAGAGGCTAAAGCAATTGGCGCAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACGGAATTTGGTAGGGTTAAGCAAGTCAGACTCTCAACCATCTTGCAGCACTCCCTTAACGGCAGTGATACTCGCTCCGCGAGATCACCTGCTCCTGCTCCTGTGCCTCATTCCTCACACCATCACCACCACCACCACCATCATCATCACCATCACCACCATCACGATACCCATCTAACTCCTGCAACTTCTCCTATACCTGCACCTGCACATAATCCTTGGGAGGGTGTAACTCCACCTGAAGTTGGTTCTCCCGCATCTACAAAAAGTGTACCTGCACCACCGAAAAGTTCTCAAGCTCATCCTCCTGATTGTCCATTTGAGCGTAGAAAAAGGTCTAGGCGTAGTGCTGTGAGAAATACTTATCTAACACCTGCCATTGCCCCTAGCATTGAACATCATCACCATGTTCCTATTTCATCACCAAAACCACAGGTTGAACCCCCTCCCCCTACACATACCTCTCATTCGGTACCTGCTTTGAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCTGAGCCCCCGCCTAAGAACGGACCTGCTGCAGAACAACCTAAGAACGGACCTGCTGCAGAACAACCTAAGAGCTCATCTTCTGCAGGTTGTCTTGGAACCGTTAAATGGACATCTTTAATATTTGTTGTACTTGTGTTACATGTGTGA 1434 0.4512 MGKSEEEQHLPRGATSSDRPQNAETECRRCCCSQIQKLLGFRCILVFLFSLALFLSALFWLPPFLRLADHKNLHDNSKYKGHDIVASFIVKKPVAVLEDNKLQLAREIFDEIEAPSTTTVNILSLDPLPQPNRTKVVFAVDPDGGEYSETSSASISLIRSLFTSLKVQTKFNFSLNFPIYQIQRNFNELTNQLKSGLHLTSYENLQVVLSNSEGSTVDAPTIIQSSVLLAVGIPPSKQRLKQLAQTIMGPHNLGLNNTEFGRVKQVRLSTILQHSLNGSDTRSARSPAPAPVPHSSHHHHHHHHHHHHHHHHDTHLTPATSPIPAPAHNPWEGVTPPEVGSPASTKSVPAPPKSSQAHPPDCPFERRKRSRRSAVRNTYLTPAIAPSIEHHHHVPISSPKPQVEPPPPTHTSHSVPALSPLPNVAFAHAEPPPKNGPAAEQPKNGPAAEQPKSSSSAGCLGTVKWTSLIFVVLVLHV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02159 477 MobiDBLite consensus disorder prediction 1 21 - -
Vifa5g02159 477 MobiDBLite consensus disorder prediction 276 457 - -
Vifa5g02159 477 MobiDBLite consensus disorder prediction 294 314 - -
Vifa5g02159 477 MobiDBLite consensus disorder prediction 399 413 - -
Vifa5g02159 477 PANTHER F20B24.21 166 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02159 Vifa-Chr5 717961501 717966317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02159 1 473 C3H Transcription Factor Family AT3G10810 39.423 8.59e-64 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02159 - - gmx:100792490 504.597