Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02140 ATGGAACTCTTCTTCTCCCTCCAATCATTTCTCATCCCCATTCTCTCTTTTCTCTTCTTCTATCTCTACCTTCGTTTCTTCACCATATCAAATAAACCCGGCTTCAAAACCTACCCTCTTCTCGGAGCGTTACCCTCATTCATATCAAACCGCCACCGCTTCCTCGAATGGACCACCCAAGTCCTCCGCGACTGTCCCACCAACACCGCCGTCTTCATCCGCCCCGGCAAAGTCCACGGTATCATAACAGCCAATCCAGAAAACATACAACACATCTTGAAAACCAAATTCGAAAACTACCCGAAAGGCGAAAGATTCATCAGTTTACTCCAAGATTTTCTCGGCACAGGAATCTTCAACTCCGACGGTGATCTCTGGAAGCTTCAGAGAAAAACTGCTAGCTACGAGTTCAACACGAAGTCCTTAAGAAACTTTATCATGGAAAATGTAACAGTTGAAACGCAAACTAGGCTCATTCCGATTCTCTCTAAAGCAGCGGAGAAAAACAACGTCCTTGACTTGCAGGATCTTTTAGAATGTTTCGCATTCGACAACGTTTGCAAAGTCGCCTTCAACGTCGACCCTGGATGTCTCGGCGGGGAAGGCACCACCGGAAACGCCTCCTTCATGCGTGCTTTCGAAGATGCAGCACTGTTGAGTTCCGGAAGGTTCATGTCTCTTTTCCCATCGTTATGGAAAGTGAAAAAAACTCTCAACGTCGGAACAGAACGGAGATTGAAACAATCAATCACAACCGTTCATGAGTTCGCTGATGAAATCATACGGTCAAGAATGGAAGCGAAAGAAGGTCCTTCAAAAGGTGAGGATTTATTATCTCGTTTCATCGGAACAGAAGAAGCTTCGCCGGAGTTTCTCCGTGATATCGTAATAAGCTTTATTCTGGCCGGACGCGATACGACTTCGTCTGCATTGAGTTGGTTTTTCTGGATCCTATCTTCGAGGAATGATGTTAAGGAGAAAATAAGCAAAGAGATCGAAACCGTGCGTTCGAGAAGTGATGATAAAGTGGCGTCGTTTGGTTACGAGGAGTTAAAGGAGATGCATTACTTGCATGCGGCGATTACGGAGGCGATGAGATTGTATCCGCCGGTTCCGGTTGATACGAAGGAGTGTTTAAGCGACGATGTTTTGCCGGACGGGACTAGAATTAAGAAAGGTTGGTTTATTTCTTACCATACTTATGCTATGGGGAGAATAGAGAGTGTTTGGGGAAAGGATTGTAATGAGTTTAAACCTGAGAGGTGGTTGGAAAATGAGAAGGTTGATGGTTTTGGTGTTTGTAGAAGTGAGAGTCCATTTAAGTTTCCGGTGTTTCATGCGGGTCCTAGGATGTGTTTAGGGAGAGAAATGGCGTATATTCAGATGAAGTCTATTGCGGCTTCTGTTATGGAGAGGTTTGAGGTTGTTGCAGTGGAGAAAGAGAATTGTCCTCAACATGTTTTGTCTTTAACTTTAAGGATGAAAGATGGGTTGCGTGTGCGTGTGCGAGTGAGGTAA 1518 0.4493 MELFFSLQSFLIPILSFLFFYLYLRFFTISNKPGFKTYPLLGALPSFISNRHRFLEWTTQVLRDCPTNTAVFIRPGKVHGIITANPENIQHILKTKFENYPKGERFISLLQDFLGTGIFNSDGDLWKLQRKTASYEFNTKSLRNFIMENVTVETQTRLIPILSKAAEKNNVLDLQDLLECFAFDNVCKVAFNVDPGCLGGEGTTGNASFMRAFEDAALLSSGRFMSLFPSLWKVKKTLNVGTERRLKQSITTVHEFADEIIRSRMEAKEGPSKGEDLLSRFIGTEEASPEFLRDIVISFILAGRDTTSSALSWFFWILSSRNDVKEKISKEIETVRSRSDDKVASFGYEELKEMHYLHAAITEAMRLYPPVPVDTKECLSDDVLPDGTRIKKGWFISYHTYAMGRIESVWGKDCNEFKPERWLENEKVDGFGVCRSESPFKFPVFHAGPRMCLGREMAYIQMKSIAASVMERFEVVAVEKENCPQHVLSLTLRMKDGLRVRVRVR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02140 505 SUPERFAMILY Cytochrome P450 24 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PANTHER CYTOCHROME P450 23 499 - -
Vifa5g02140 505 CDD CYP86A 69 498 - -
Vifa5g02140 505 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifa5g02140 505 Gene3D Cytochrome P450 17 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 Pfam Cytochrome P450 33 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 FunFam Cytochrome P450 27 505 - -
Vifa5g02140 505 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa5g02140 505 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02140 Vifa-Chr5 714237538 714239055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02140 30 505 Cytochrome P450 AT3G56630 61.088 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02140 - - gmx:100812147 735.332