Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02063 ATGAATATGTCACAATCCAAACGCATGTTCTTGAACACCTCGTTTCTTGTGTTGTTTTGTGTTTTTCTTCTTGTTCACTTCCAATCCTATGACCATGTTTTTCTGAAAAGCAAAACCAACAACATAAGTAAAAACAAAAACTTTGTCTTTGGGACCAACCATGATGAGAATTGCAAGAGTTTCCATAGCTTAACTGATTATAAAGCTAAGTGCTTTTACCTTAAATCAAGCAACCCATGTGTCTCTCAAGGCTATATTGATTATCTTTACCTTTTCTATTGCAAATTTGGTGGATTTCCTTTACTGGGTCACACACTTTTGTTCCTTTGGTTATTGGTCATGTTCTATCTTCTAGCCAACACAGCTTCTGAATACTTTTGTCCTTCTCTTGAAAGCCTCTCCAAGCTTTTGAGGCTTTCACCAACAATTGCTGGTGTCACTCTTCTCTCTTTTGGCAGTGGTGCTAATGATGTTTTTTCTACACTTGTTTCTTTCAAGAGTAATGGAACACAGGACGTTGGATTCAATGCTATTCTTGGCGGTGTTTCGTTTATTTCATGTGTTGTGGTGGGAATCGTGAGTATTTCAATTAGACATAAAGGGATTCATGTTCAAAAATCAGCTTTGATAAGAGATATTTGTTTTCTTCTCTTTGTTGTTGTTTGCTTGTTCACTATCTTCATCATTGGTGAAATTAACCTTGTTGTGGGAATTGGGTTTTGTTTGATGTATGTTGTGTATGTGGTTATTGTTTATGTCACAAGTAAAAGAAAAGATGTTTGTGATGAAGAAGCAGAAGACGGTGAAACTGAAAGTGATTCAAGACATGGCAAGGGCAATGATTTAGGTGTTCCTCTACTTGGTTTTATGGAGAAGGGAATGATCAATGAAGCTCAAGAATGTGAGTTTAAAATTGAGAAGAATTGTTGCTATGAAAAATCTTCAATCTCTAGAATGTTACTTTATGTTTTGGATATGCCTCTTTACTTGCCAAGGAGATTAACAATTCCTGTTGTTTGTGAAGAGAAATGGTCTAAACTATATGCAGTTTCAACATGTATGTTATCACCACTTTTATTATCTTTCCTTTGGAAAAACAATTTCTCAAACTCATCAAGCCTAATAGTTTACGGAATCGGGTTATCGGTCGGAGTGACATTAGGACTAACCGCGATTTTCACGACGGAGTCATCGAATCCGCCGAAAAAGTACTTGTTACCATGGCTAGCAGCAGGGTTTGTGATGAGTGTGACATGGAGTTACATTTCAGCTCAAGAGTTAGTAGGATTGTTAGTTTCAATTGGTTACATATGTGGAGTTAGTCCTTCAATACTTGGATTAACAGTACTTGCTTGGGGAAATTCAGTTGGTGATTTAGTAACAAATTTAACAATGGCTTTGAATGGTGGAACAGATGGAACACAAACAGCAATTTCAGGTTGTTATGCTGGTCCTATATTTAACACAGTTGTTGGATTGGGATTGTCTCTTGTGTTATCAACTTGGCGTGAGTATCCTTCATCTGTTGTGATTCCTAGAGATCCTTACTTGTGGGAAACATTGGCATTTTTGGTGGTTGGATTGATTTGGGCACTTGTGGTTTTGGTTAGAAAGGATATGAAGCTTAATGCAATGTTAGGTGGAGGGCTTTTGGCTATTTACTTTAGTTCTGTTATTCTTAGGTTAATACAAACACTTGGGCCTCTTCAATTTAAGGATATGTTAGTGTGA 1731 0.3686 MNMSQSKRMFLNTSFLVLFCVFLLVHFQSYDHVFLKSKTNNISKNKNFVFGTNHDENCKSFHSLTDYKAKCFYLKSSNPCVSQGYIDYLYLFYCKFGGFPLLGHTLLFLWLLVMFYLLANTASEYFCPSLESLSKLLRLSPTIAGVTLLSFGSGANDVFSTLVSFKSNGTQDVGFNAILGGVSFISCVVVGIVSISIRHKGIHVQKSALIRDICFLLFVVVCLFTIFIIGEINLVVGIGFCLMYVVYVVIVYVTSKRKDVCDEEAEDGETESDSRHGKGNDLGVPLLGFMEKGMINEAQECEFKIEKNCCYEKSSISRMLLYVLDMPLYLPRRLTIPVVCEEKWSKLYAVSTCMLSPLLLSFLWKNNFSNSSSLIVYGIGLSVGVTLGLTAIFTTESSNPPKKYLLPWLAAGFVMSVTWSYISAQELVGLLVSIGYICGVSPSILGLTVLAWGNSVGDLVTNLTMALNGGTDGTQTAISGCYAGPIFNTVVGLGLSLVLSTWREYPSSVVIPRDPYLWETLAFLVVGLIWALVVLVRKDMKLNAMLGGGLLAIYFSSVILRLIQTLGPLQFKDMLV 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02063 576 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 309 569 - -
Vifa5g02063 576 Pfam Sodium/calcium exchanger protein 108 252 IPR004837 GO:0016020|GO:0055085
Vifa5g02063 576 Pfam Sodium/calcium exchanger protein 409 561 IPR004837 GO:0016020|GO:0055085
Vifa5g02063 576 Gene3D - 139 267 IPR044880 -
Vifa5g02063 576 Gene3D - 360 562 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02063 Vifa-Chr5 683871034 683872764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02063 2 567 Antiporters AT5G17850 49.306 3.59e-163 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02063 K13754 - gmx:100787016 748.814