Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02012 ATGGCGGTGAGTATCATATCTCAATCCATTGTTATCCCTTCCAAACCAACCCCTAATCCAAAACTGTTTTCCTTATGTGAACAAATCAAGCTTCGTACTCATGCTCCTCTCCTCTACGTTTACAATCCTCATAACAACATATCAACCTTTCTTGAAACACTTAGAAACTCTCTTAGCAAAGTTTTGGTTATTTACTATCCACTAGCTGGAAGGTTGAGTTGGATCAAAGGTGAAAGATGGGAACTTAATTGCAACGGCAAAGGAGCAGTTCTATTAGAAGCTAAATGTGAAACTAACTTGAAAGATTTGGGTGATTTTGTGCCGAATAATTTGGTTTCACAACTCATACCAAACATTAATTATGATGTTCCAATTGAGGATGTTCCCTTATTGGTGGTGCAACTTACGAGGTTCCGTTGTGGCGGTTATACTTTAGGCGTTGCTTTATGTCGAGCTGCAACGGATGGGACGGCTGCCATGCGTTTCATGAGGTCATGGGCTAAGTTGGCACGTGGGGAGAATATCAGCCCTAATGACTTTCCGTGTCACGATCGAACTTTGTTAAATTCACGTAAACTAGCGAATTCATCGATGTCACATTGGCATTCTGAGTTCGAAGCACCTCCTAGTTGGATGTCTCGTGATTTGGGAGGCAATAGAGAAACGAGTGTTGCTATTATGAAACTCACGCGAGAACAAGTTTTAAGACTTAAGAAAAACGTTAGTTTTGGCGTGAGTTTTCAATCTACCTTCAAAGATGTTCATAAGACAAAACCTTTTACTACTTTTGAGGTTATTGCAGGACATCTTTGGAGGTGTGTCACTAAAGCTCGCTCCACGCGTGGAAGTAGTGACCAACCCACAAGGTTGTCGACTCTGGTTAATTGTAGAAATCGTTTAAAACCACCTCTTCCTAGTGGTTACGTCGGAAATGCAGCATTTCCGACCGTGACACCAACTCGCTCCTTTAATGATCTTATTCGCAAACCTTTAGGTAACGCGGTTGAGGATGTTAGGAATGCACTTGAAAGGGTGACAGGGGAGTTTGTAATGTCGGCACTTGATTACATAGATAGGGAGAAGAACATGGATTTATTAAGATACAATTTTCACTACCCTGCAAAGAGTGTTTGTGAGGATGGAGAATATAAAGGGAACCCAAATCTATTTGTTGTAAGTTGGATGAATTTTTCATACAAAGAAGCAGATTTTGGGTTGGGAGAACCATTTTATTTTGGGCCAGGGTACATGGATTCTGAAGGGAAAGCATTTGTTATGAACAATAATGGTGATGGTGATGGTATTGTGGTGGCAATTTCTTTGGAGGCATCTTGTATGGATATATTTAAGAAATTCTTCTATGATGATATCGAAGAGGTGTTTTGTACTTCCAAATTGTGA 1401 0.404 MAVSIISQSIVIPSKPTPNPKLFSLCEQIKLRTHAPLLYVYNPHNNISTFLETLRNSLSKVLVIYYPLAGRLSWIKGERWELNCNGKGAVLLEAKCETNLKDLGDFVPNNLVSQLIPNINYDVPIEDVPLLVVQLTRFRCGGYTLGVALCRAATDGTAAMRFMRSWAKLARGENISPNDFPCHDRTLLNSRKLANSSMSHWHSEFEAPPSWMSRDLGGNRETSVAIMKLTREQVLRLKKNVSFGVSFQSTFKDVHKTKPFTTFEVIAGHLWRCVTKARSTRGSSDQPTRLSTLVNCRNRLKPPLPSGYVGNAAFPTVTPTRSFNDLIRKPLGNAVEDVRNALERVTGEFVMSALDYIDREKNMDLLRYNFHYPAKSVCEDGEYKGNPNLFVVSWMNFSYKEADFGLGEPFYFGPGYMDSEGKAFVMNNNGDGDGIVVAISLEASCMDIFKKFFYDDIEEVFCTSKL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02012 466 Gene3D - 1 207 IPR023213 -
Vifa5g02012 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 453 - -
Vifa5g02012 466 Gene3D - 217 456 IPR023213 -
Vifa5g02012 466 Pfam Transferase family 1 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02012 Vifa-Chr5 670679836 670681236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02012 1 455 Monolignol Biosynthesis Gene Families AT5G48930 34.490 3.53e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02012 K13065 - gmx:100775549 590.112