Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02011 ATGAGTTTCTCAAATGTTACCTATTCCCTTATCACAAACCCCGACAATACACAACGGGTGTGTTTCAATAAGATTCAATCACACGGTTCATCGCTTTGGATTGACAATGCTTTAGAACAAACACTACCTGCATTTGTTCTTCAATTTGCTCTTACAATTGCACTCAACCGTGCTCTCCTCTTCCTCGCCGAATCATGCAATGTACCTCGCATTGTTCCCAACATTTTTTCTGGTTTTTTATTAGGTACATCAGCTTTGGGGAAATGGAATCCTTTTTTCAACAATGTATTCCCTTTCGACAATATGTTACCATTAGAGACAATGGGAGCATTAACACTTGTTTACTACGCGTTCTTGCTTGGCTTAGAACTCGACTTGAAACCGATTACAAGGTTTTACTACAATAAGAAAGCAATTGTTGTTGCACTTGTTGGTTTAGTCTTTTCTTTACCGACTGGTATTGGTTTATACTACCTTCTTATAACCGATATGGGTCGCAAGTCATTGTCGCTTTTAGATAATGATAAACACATGAGAGGTGCAATATTTTGGGGGCTAACACTTTCTTGTAGTAGTGAGTTTCCTGAGGTTGCTAAAATCCTTTTGGATTTGAAGCTTTTGCTAACGGAGAATGGACAGTTGGCATTAACTTCTTCGTTGATTAATGACTTGTTCTCCTGGACATTGCTTTTGATGGTTCTGACACAATTATATTATGCTTCGTTGTTTTCGCTATTTGTCATCCTCGTACTTGTGTTGGTGTGTTTTTATGCGATTCATCCTTTAGCTAAGTGGCTTGTTAAAAAATTTGGGAATGGTGATCGCGAGTTTGTCGAGTCAGAAGTTGTTGTTCTTCTTCATGTGGTTTTGCTCATTGGATTAGTCTTTGATGGGTTAGGTGCACATTCTATAACAGGAGCTTTCTTTTTAGGGGTTATTATTCCGAAGGGTTCGCTTAACAATGCAATTCAAGATAAGGCTTTTGATTTTGTGTCTGTGTTCATGATGCCACTGTTTTATCTCATTATTGGGGAGAGAACACATATTCAAGTTTTGGCTTGGGAAACGCATTGCACAACCGTTGTGATTGTTATTGTGTTGGCTTTCTTGGTAAAATTGGGATGCATATTTGCAGTTTCTTGGATATATCAGATGCCACACATGGAAGGATTATCGCTCGCACTTCTCATGAATACTAAAGGAACAATGCCGTTAATCATTTTGCACACCGCCATGGATAGACGCGAACTGGGTAACCAACCCTTTGTGGTGATGTTGTTGGCATGTTGGTTAATGACAGCTATTTCTGGTCCTATCTTAGCTATGATCACAAAAACCCTTACTACAGGCAGAGTTCCTGGAGGTCAAAGGAAGAATATGAAAGGCACACGACCAGACTCATCACTTAGAGTGTTGGCCTGTGTCCACTCAAAACACGATGCCAATGCCATCGTCGACCTTCTCAAAGCATCAAGTCCATCAGTTAGGTCCCCTATTCAGGTGTTGGCAGTGGAGTTGATCAAGATGACAAACCGGCCAACTTCATCACTAATAGTAAAAGATGCTAGGAAGCCATCATTTCGCTCAAATTCAAGCAGGTTAGACAGCATAAAACGAAACAATGGTGACAACCTTGGTAGCTTCGACAACCTCAGCCAAGCCATCTTTGCTGACAAACTCAGAGTTATCTCCCAATATAACTCTATGCACAAGGATATCATAAACCTCTGCACCCGCAGACATGTAAACCTCATTGTAACCACTCTATACAAACAAGCGACTTACGATGGATTAGGTGTTGGCACCGCTACCGCTAGAGCCATGAACATAATCAACAGAGACCATGAAAACAAAGATGAGAAGAAAATAGTGTTGGAGAATCTAATAAAAGAAGCACCATGTTGTTTAGCCATTTTTGTCGATCGTGGTTTCAGCGGTGATGAAAACCATCCTAAAGAGAAGAAAATAGCAATGTTCTACATTGGTGGTGTTGATGACCGTGAAGCACTTTCTTATGCTTGGAGAATGAGCAGGAACATGGAGGTTCAATTAACAGTGGTTAGGCTTGTTTGGGACAATCCTGAAGATGAGTTTGATGAAGTGGACAAAGAATATTTAAAAGTGTTTGCACATCAAACAATACATTCGCCAACAGTGAGGTATCTGGAGAAAATGGTGAAGAACGAGAACGAAACTGTGAAGCTTTTAAATAGGATAGGGAATAAAGGATTTGATATGTATATTATTGGGAGAGGACATGGGAGGAAGATGTCATTGGCACAAACAGTTGATCCTGTTTTGGATGAGCCTATTTTGGGTCCTCTTGGGGATACTTTGTCAGATTTGAATTCTGCTTCTAAGACATCTATCTTGATATTTCAAAGAGATGCTGAAGCTCAGTGTGGTGGCGGGGGTGATGGTTTGGGGAAACATGATGTTTCTGCGACGCCTGTGCGGTTTTTTGGTGGTGGTGTGAATTCACAACAGGAGATGTTTGATCCACCAACGACATTAGGTCACAATATTGATGTATAA 2535 0.4047 MSFSNVTYSLITNPDNTQRVCFNKIQSHGSSLWIDNALEQTLPAFVLQFALTIALNRALLFLAESCNVPRIVPNIFSGFLLGTSALGKWNPFFNNVFPFDNMLPLETMGALTLVYYAFLLGLELDLKPITRFYYNKKAIVVALVGLVFSLPTGIGLYYLLITDMGRKSLSLLDNDKHMRGAIFWGLTLSCSSEFPEVAKILLDLKLLLTENGQLALTSSLINDLFSWTLLLMVLTQLYYASLFSLFVILVLVLVCFYAIHPLAKWLVKKFGNGDREFVESEVVVLLHVVLLIGLVFDGLGAHSITGAFFLGVIIPKGSLNNAIQDKAFDFVSVFMMPLFYLIIGERTHIQVLAWETHCTTVVIVIVLAFLVKLGCIFAVSWIYQMPHMEGLSLALLMNTKGTMPLIILHTAMDRRELGNQPFVVMLLACWLMTAISGPILAMITKTLTTGRVPGGQRKNMKGTRPDSSLRVLACVHSKHDANAIVDLLKASSPSVRSPIQVLAVELIKMTNRPTSSLIVKDARKPSFRSNSSRLDSIKRNNGDNLGSFDNLSQAIFADKLRVISQYNSMHKDIINLCTRRHVNLIVTTLYKQATYDGLGVGTATARAMNIINRDHENKDEKKIVLENLIKEAPCCLAIFVDRGFSGDENHPKEKKIAMFYIGGVDDREALSYAWRMSRNMEVQLTVVRLVWDNPEDEFDEVDKEYLKVFAHQTIHSPTVRYLEKMVKNENETVKLLNRIGNKGFDMYIIGRGHGRKMSLAQTVDPVLDEPILGPLGDTLSDLNSASKTSILIFQRDAEAQCGGGGDGLGKHDVSATPVRFFGGGVNSQQEMFDPPTTLGHNIDV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02011 844 Gene3D - 43 451 IPR038770 -
Vifa5g02011 844 PANTHER CATION/H + ANTIPORTER 22 795 - -
Vifa5g02011 844 Pfam Sodium/hydrogen exchanger family 58 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa5g02011 844 MobiDBLite consensus disorder prediction 825 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02011 Vifa-Chr5 670581343 670584360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02011 20 795 Antiporter Super Family AT2G13620 31.450 1.44e-126 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02011 K26731 - psat:127126630 1428.31