Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa5g01991 | ATGGCAATTGCACGCACTGGAGTCTACGTCGACGACTATTTGGAGTACGCTAATACATTGCCCGCTGAGCTTCAGAGACTACTTAACACCGTCCGTGAACTCGATGAACGATCCCAATCTATGATAAACCAGACTAGGCAGCAGACAAAGTACTGTATGGGGTTCTCGTCTCATGGCTCTAAGAAGGGTAGTCATAATAATAATCATAATTATAGTTATAATAATAATTATGCTAACGGCGACGATGATGCTTCTATCGAGAAACTGCTAAAAGAAATTGAGGCAAACCAGGATAGTGCTTTGAGTCTATGCACTGAGAAGGTTTTGCTGGCGCAGCAAGCTTATGAACTGATAGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAACTTCGCTGAAGATTTAAAGCAAGAGGGGAAAATATCACCAGATGAACCAGCCATTCTCCCCCCACTGCCTATTGTCCCTAAACCGGAAAAGCGCAGGCACGTGTATGGTACACCTCAATCAAAGAGACTTGATTACAGGGAAAGAGACTGGGATCGGGACTTTGAGCTGATGCCGCCACCAGGAGGCCATAAGAAGGATTATGCGGCCCCTATGGATATTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTTGGAGACATGATTGCTTGTGACAATGAAAATTGCCGAGGAGGTGAGTGGTTCCACTATTCATGTGTTGGCCTAACCCAAGAAACAAGGTTCAAGGGAAAGTGGTATTGTCCAACTTGCAGATTACAACCACACTGTTAA | 807 | 0.4374 | MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGSHNNNHNYSYNNNYANGDDDASIEKLLKEIEANQDSALSLCTEKVLLAQQAYELIDSHVKRLDEDLNNFAEDLKQEGKISPDEPAILPPLPIVPKPEKRRHVYGTPQSKRLDYRERDWDRDFELMPPPGGHKKDYAAPMDIDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEWFHYSCVGLTQETRFKGKWYCPTCRLQPHC | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa5g01991 | 268 | CDD | ING_plant | 19 | 129 | - | - | |
Vifa5g01991 | 268 | Pfam | Inhibitor of growth proteins N-terminal histone-binding | 9 | 132 | IPR024610 | - | |
Vifa5g01991 | 268 | ProSiteProfiles | Zinc finger PHD-type profile. | 213 | 265 | IPR019787 | - | |
Vifa5g01991 | 268 | Coils | Coil | 24 | 44 | - | - | |
Vifa5g01991 | 268 | CDD | PHD_ING | 215 | 262 | - | - | |
Vifa5g01991 | 268 | PANTHER | INHIBITOR OF GROWTH PROTEIN | 2 | 263 | IPR028651 | - | |
Vifa5g01991 | 268 | SMART | ING_2 | 9 | 132 | IPR024610 | - | |
Vifa5g01991 | 268 | SUPERFAMILY | FYVE/PHD zinc finger | 195 | 264 | IPR011011 | - | |
Vifa5g01991 | 268 | Pfam | PHD-finger | 215 | 263 | IPR019787 | - | |
Vifa5g01991 | 268 | Gene3D | - | 5 | 130 | - | - | |
Vifa5g01991 | 268 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 207 | 265 | IPR013083 | - | |
Vifa5g01991 | 268 | SMART | PHD_3 | 215 | 263 | IPR001965 | - | |
Vifa5g01991 | 268 | FunFam | PHD finger protein ING | 207 | 265 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa5g01991 | Vifa-Chr5 | 665367066 | 665369005 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Vifa5g01991 | ING | 2e-18 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa5g01991 | - | - | lang:109339676 | 468.388 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa5g01991 | 5 | 665367066 | 665369005 | Vifa5g01991 | 5 | 665367066 | 665369005 | ECH |