Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01968 ATGGCAACCATATGTCAAGAAACTCAACCTCTTCTTCTAGACATGAAGGTTACAATCCATAAAACTTCAATGGTTTTTCCATCAAAACAAACCGAGAAGAAATCCTTGTTCTTATCAAACATAGATAAGGTTCTCAATTTCGACGTTAAAACGGTTCACTTTTTCGAAGCAAACAACGATTTCCCTCCTGAAATAGTGACCGAGAAGTTGAGAAAAGCTCTGGAAGATGCTCTGGTGGATTATGAATTCCTTGCTGGAAGAGTGAAGATGAACTCTGAAACCAATAGGTTGGAGATAGATTGCAGTGCAGAAGGTGTTGGATTTGTTGTGGCTTCTAGTGAGTATACGTTGGATCAAATTGGAGACTTGGCTTACCCTAATGAAGCCTTTACACAATTTGTACACAACACCAAAGAGTTTTTGAAGATAGGCGATATACCTCTATGTGTTGTTCAGTTGTCCCCCAAGTCATTGTTGTTACTTGGAAATGCAAGGATTGAGGTTCATTGGTTTCCCTCTATTTTCATATTGTACCCCCCGGGTGAACCCCTGCTTAGCCAATGTGGAAATGGAAAATCTCGAGGTGCTGGATGTGGTTCTCTAGAAGTTATAGCCCCTTATGCAGACACTATACATATTAGTGATAGTTTTGACTATATGAGGAGTTCTGATAATGGTGGTGATGAATCTGGGGGTCTTCGGGGGGACGAGGGTCTGGAGGAGCCTGTGGAGAAGGATACAAGGGCTAACCCATTTAGGTTTGATATTAAGGAGATTGGTCATGGTTTCTCTTTCACTGAAGTGCATGTGGAAAACCTAGAAAGGGTTGAGAATTACTAG 840 0.4131 MATICQETQPLLLDMKVTIHKTSMVFPSKQTEKKSLFLSNIDKVLNFDVKTVHFFEANNDFPPEIVTEKLRKALEDALVDYEFLAGRVKMNSETNRLEIDCSAEGVGFVVASSEYTLDQIGDLAYPNEAFTQFVHNTKEFLKIGDIPLCVVQLSPKSLLLLGNARIEVHWFPSIFILYPPGEPLLSQCGNGKSRGAGCGSLEVIAPYADTIHISDSFDYMRSSDNGGDESGGLRGDEGLEEPVEKDTRANPFRFDIKEIGHGFSFTEVHVENLERVENY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01968 279 MobiDBLite consensus disorder prediction 230 245 - -
Vifa5g01968 279 Gene3D - 13 162 IPR023213 -
Vifa5g01968 279 MobiDBLite consensus disorder prediction 224 245 - -
Vifa5g01968 279 Pfam Transferase family 15 152 - -
Vifa5g01968 279 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01968 Vifa-Chr5 653175477 653178584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01968 15 154 Monolignol Biosynthesis Gene Families AT5G48930 35.417 8.71e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01968 K13065 K15400 gmx:100305576 217.238