Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01967 ATGGAGAAATCTTCTATCTTAGGTTTAATTCCAATAAGATTTCTAGAACCTCTTCTAAAGAACTTGTGGCGTCAATCATCTACAGTCGAGGTAACATCCTTCCAGTGCGGGGGTTTCGCAATTGGCATCACAACCAGTCATACATGCTTTGATGGACTTAGCTTTAAAACATTCTTAGAAAACCTTGCATCATTTGCTTCTAACACACCATTAGATATGACACCATGCCATAATAGACAACTCTTAGCCGCACGATCTCCTCCACGTGTTAGCTTCCCCCATCCCGAGATGGTCAAACTTGATAATATAACTAAATCGAGTGTCTTTAAAGCCTCCTCAGAAGAACTTGACTTTAAAGTTTTTCGATTAAACTCTAAGCATATCAATACCCTTAAGGAAAAAGCAAAGGGTAACAACAATGTTCGTGTCACGAGTTTTAATGTCATCAGTGCACATCTATGGAGATGCAGGACGTTATCTGGCACGTGTGATCCTGATAAGTCATCGACTATACTATATGCGGTTGACATACGTTCCAGATTGAATCCTCCATTGCCGAAAGGATACATCGGGAATGCGATTTTAACTGCATACGCTACAATGAAGTATGAGGAATTAAAGGAATGTGAATTCTCGAGGTTGGTGGAGATGGTTGGGGAGGGTTCAAGAAGAATGAATGATGAGTATGCAAGGTCAATTATTGATTGGGGAGAGTTGTATAATGGTTTTCCAAATGGGGAGGTTTTGGTGTCTTCATGGTGGAGGTTAGGGTTTGAAGAAGTGAAGTATCCATGGGGAAAGCCAAAGTATTCTTGTCCAGTGGTGTATCGTAACAAGGATATTATATTATTATTCCCTCCTTTTCATGGATCAACTGAAGGTGGTGATGATGGAGTAAATATAATACTGGCTCTTCCTCCTAAAGAAATGGAAAATTTTCAAAGCCTCTTTTACACGTTTTGA 963 0.3977 MEKSSILGLIPIRFLEPLLKNLWRQSSTVEVTSFQCGGFAIGITTSHTCFDGLSFKTFLENLASFASNTPLDMTPCHNRQLLAARSPPRVSFPHPEMVKLDNITKSSVFKASSEELDFKVFRLNSKHINTLKEKAKGNNNVRVTSFNVISAHLWRCRTLSGTCDPDKSSTILYAVDIRSRLNPPLPKGYIGNAILTAYATMKYEELKECEFSRLVEMVGEGSRRMNDEYARSIIDWGELYNGFPNGEVLVSSWWRLGFEEVKYPWGKPKYSCPVVYRNKDIILLFPPFHGSTEGGDDGVNIILALPPKEMENFQSLFYTF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01967 320 Gene3D - 99 319 IPR023213 -
Vifa5g01967 320 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 317 - -
Vifa5g01967 320 Gene3D - 13 98 IPR023213 -
Vifa5g01967 320 Pfam Transferase family 28 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01967 Vifa-Chr5 653156958 653159254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01967 28 318 Monolignol Biosynthesis Gene Families AT5G48930 27.597 2.28e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01967 K13065 K15400 gmx:100805510 439.113