Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01887 ATGGAAACTACCAACAACAAAGACGAACCAGAAATCTGCAAACTAGATTTCAATGATTCCGACATCGAATACATCAGTTACGGCGGCGAACACCACCTCCCTCTCATCATGAACCTCGTCGACGAAGAACTCAGCGAACCTTACTCCATCTTCACTTATCGTTACTTCGTCTATCTATGGCCTCATCTTTCTTTCCTGGCGTTTCATAAGGGTAGATGTGTGGGAACGGTGGTTTGTAAAATGGGAGAACATCGTAACACTTTTAGAGGATACATTGCTATGCTTGTTGTTATCAAACCCTACAGAGGAAGAGGCATTGCTACAGAACTTGTTACTAGGTCTATCAAGGTCATGATGGAATCTGGTTGTGATGAGGTTACATTGGAAGCAGAGGTCACAAATATAGGAGCACTTGCGCTGTACGGTCGCCTTGGCTTTATCAGGGCTAAACGTCTCTTTCACTACTATTTAAATGGAGTCGATGCTTTCCGTCTCAAACTTTTATTTCCTCGTCCAGAGATGCACACTCATAGTGATCACGGGGATTCACAAATTCTGGAATGA 564 0.4344 METTNNKDEPEICKLDFNDSDIEYISYGGEHHLPLIMNLVDEELSEPYSIFTYRYFVYLWPHLSFLAFHKGRCVGTVVCKMGEHRNTFRGYIAMLVVIKPYRGRGIATELVTRSIKVMMESGCDEVTLEAEVTNIGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLLFPRPEMHTHSDHGDSQILE 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01887 187 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
Vifa5g01887 187 Pfam Acetyltransferase (GNAT) family 57 146 IPR000182 GO:0016747
Vifa5g01887 187 CDD NAT_SF 64 129 - -
Vifa5g01887 187 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 9 173 IPR044542 GO:0004596|GO:0017196
Vifa5g01887 187 FunFam N-alpha-acetyltransferase MAK3 isoform A 29 179 - -
Vifa5g01887 187 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 20 170 IPR000182 GO:0016747
Vifa5g01887 187 Gene3D - 29 185 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa5g01887 Acetyltransf_1 4.9e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01887 K00670 - gmx:100806790 315.464