Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01854 ATGATTGTGGAATCAGGAAAGTGGATGGTGCTAATAGCAACTGTTTGGATACAAGCATTCACTGGGACAAACTTTGATTTCTCATCCTATTCATCTGAGCTGAAATCAGTTCTTGAGATAACTCAGCTTCAGCTGAATTGTCTTTCAGTGGCATCTGATATGGGGAAAGCTTTTGGTTGGTGTTCTGGTTTTTCACTCATGTATTTTCCTTTGTGGGTTGTTATGTTCATGTCTGCTTTCTTGGGGCTTCTTGGTTATGGCTTCCAGTGGCTTGTTATTCAGAGATTGATTACTTTGCCTTACTTTCTGGTATTTTTCCTATGCTTGATTGCAGGATGTAGCATTTGCTGGTTCAACACAATCTGCTATGTATTATGCATAAAAAATTTCACAACTAACCGTTCACTTGCATTATCTTTAAGCATCAGTTTCAATGGTCATTAG 444 0.3829 MIVESGKWMVLIATVWIQAFTGTNFDFSSYSSELKSVLEITQLQLNCLSVASDMGKAFGWCSGFSLMYFPLWVVMFMSAFLGLLGYGFQWLVIQRLITLPYFLVFFLCLIAGCSICWFNTICYVLCIKNFTTNRSLALSLSISFNGH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01854 147 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 146 - -
Vifa5g01854 147 Pfam Nodulin-like 7 146 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01854 Vifa-Chr5 541598051 541604637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01854 1 146 Nodulin-like Gene Family AT4G19450 69.863 5.05e-73 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01854 - - gmx:100804951 267.7