Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01851 ATGTTCAATTACATGTCAAATTATCAAAATCCTAATCCTCAAAATTCTCAATTTCCATCTGTGCCAACAAACCCCGCCATATTTTTTCCGGAAACACCGATTGGGTTTATGTCCGGATGTCAAGTTCCACCAGTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAATAATCGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGCGGGCAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGTTCAAAAATTTGTTGGATGTTACAAACAAGCTGTTAATGGAAAAAAAAGTGGGACATCGGAGAACGATATCATGGTTGCTGCACATGCTTTTTTTGCTCAGGATGAAGGTACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCAATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTCCAAGTTATGAGTTTAACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCAGCAATGGAAAGACTAGCTCAATGTAAGGAGGATGAGCTAGAACTAAAGGCAGTGAATATCATCATGAAAGACACTTCTACTATGAATGATAATCAACGAGATATTCATGAAAAATATTGTAATAAGATGGAAAAAAATATGGAATTTAGTTAG 831 0.3779 MFNYMSNYQNPNPQNSQFPSVPTNPAIFFPETPIGFMSGCQVPPVSTQVGTEKEERDPIVGVDQKAESFWLIIAANYNQYRGQSREKLGGQLKCRWHRINGLVQKFVGCYKQAVNGKKSGTSENDIMVAAHAFFAQDEGTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPPSYEFNSSSPMERPMGQKAAKRKGKAKEIPNAMQDARIKRAAAMERLAQCKEDELELKAVNIIMKDTSTMNDNQRDIHEKYCNKMEKNMEFS 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01851 276 MobiDBLite consensus disorder prediction 162 197 - -
Vifa5g01851 276 MobiDBLite consensus disorder prediction 162 215 - -
Vifa5g01851 276 MobiDBLite consensus disorder prediction 1 22 - -
Vifa5g01851 276 MobiDBLite consensus disorder prediction 200 215 - -
Vifa5g01851 276 PANTHER - 55 271 - -
Vifa5g01851 276 Coils Coil 217 237 - -
Vifa5g01851 276 Pfam No apical meristem-associated C-terminal domain 141 259 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01851 Vifa-Chr5 541456505 541457418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01851 42 238 Glutathione S-transferase Gene Family AT5G41240 30.918 4.16e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01851 - - psat:127115199 375.941