Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01766 ATGAGTGATTCTTCAGTGAAGAATTTGGCTATTACAGACAAGGTTCAAAAACCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTTATTGACTGGAAGAAGAGACTTGTTAAGAAAAAGCTCTTCTCCAAGAAGCTTCTCACTCCTGCTCGTGCAAAAAAGTTTAGAGGAGATGAAAAAATGCGGAATTCCAAACTTCACTTGATTGCTAATGAGAATAGTGGAGGTTTTCCAAAAGGTGGGAGTCATGGTGTAGATGTAGAGCAAAAGAGTGAAATGCGGGTTCCGAGTTTGGTAGCGAGGTTGATGGGTCTAGATTCTATTCCGGCTGCTCAGCGAGAGAAGTCGAAGAAAGCTTTGTGTCCTGATTATAGTTGTGGCGATGAGAAGGAGTGTTTGAGTAATCATTGTGAGTTGGATAGGCAAGGTAAGGATTTGGAAATAAGAGTTGTGAAGCATGATTTGCGACCTCAGAAGCTTCAGAAAACGGAAGTGTGTGAGAGAAATGCAGTGACTAGGTTTGGAGCGGAGGCTCTTCATATTAAGAGTGTTTTGTCACGAGCGAAAAAGTATAACCAACATCATAATCATCATCACCCGAAGCTTGCTTCTCCTTTGAAAAGTCCTAGGGTTAATTCTGGGAAAAGTGGTTCTCGCGGCTCTAGATTAATAGGAGCAGCTGCTAAGATTTTGGAACCTGGACTGCACTCGAGTAGAGGTAAAGGCTCTCTTACGTATCATGCGTCTACATGTCCTCTTAAGACTGGGATTGGAACGGATGGTGTTGGAAATAAGTCACCTGTTATGCAAAATCAATCTTGTTATGCTTCCAGCACAGCCAAGCCTTTAACAGGACAGTCTTCTTGCAAAAATTGTGGCAATTTGCTTGATGTAATTGATTGCACGGTGGAGGTTAGAGGACCACCAGATGTTCCTCCGCCGATTGTTTCAGACGTGGAAATCAATGCTACCTCTATGGTATCGTTGATTAAGAAGGGAAAGTCTTTTGCTCCCTCTCAAGAACAAGGAAGAGATATCATTCTTCCGAGAAGTCAGGGAAAGTTCTCATCGTCTGTTGCTGATGAAGAGGGGAAGAATTATGCACAGCGCTCACGAAATGAACCGACTACCATAAGAATTCCAATGCCCCGCGAAGGTCCACCTAAATGTAGTTCATCATGCCAACCATTAAGGGCTCAAGAGGATGATGCTTCTTCTTTTGCCTACAAACACAAAACACAAGAATCAAGATTAAGTAGTGAAGGCTCTTCATCTGGATCTACATCGAGTAGTACGCAAGTAAAAAGAGTATCTTCATACGCGAGCACTGCAAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGCGTAAGTGGTCGAACGAGGATGAGGTCACCTACTAAAGTTGATAGTTCCAAATTTGACTTAGAGAAAAAACCTTGTTATAGACAACAGCACGAGTCCTCGTCCCATGTTAGGGCATTGGAGAGGAAAAGAAGGACCGTGAATGTCACACAACTTGAAGGCACGACTCCTGCCAATTCAGTTGGTTTGAAACAGAGAAATCTTCGCCGTGATGCAATTGTTGGAAAAAGGAGGGACTTTGACTCTTCCTCATTGAAGAGTTCCAATGTAAAAGCCAAAGGACGCGGTCAAGAGGAACCGGTTAAGGTGAGCCACAATAGGAACAATGATGCAGTTTCATTCACATTTAATTCCCATTTGAAGCAAAAGACGGGAATGCCAGTGAAGGTGGAAGAGACAAGCATTAACAATGAGAGGAATAAATACTTCCAAAAACCTTCACCTTTGAAAGTCGATGATTTAAGTGGTTTTCTAGAACAAAAGTTGAAGGAACTAACCTCTCGAAAAAACGAGTCGGCTACAAATGCTCTACCTCAAAAATCAAGTGCTGCCATTCTTCAAGAGCTGATATCTGCTCTAAGTTCCGAAAGTTTGATCTGTCATGATGGTCATATGCATAATGAAGATGCTGGATTCTTTGGTGAAGCCAAACATGAAAGGTTGTTAGGAACCTCTTGCAATGAGAATCATCTCAGTCCTGGATCTGTTTTAGAAGCTTCATTTTCTTCCAGTAGTCTCGACGAAAGCTCAGGGCGTGGTTTTCATCCCGATTCTATGACTTTCTCGTATAGCCAGGCGGAACTGATGGAACAAGACGACGAACTCTTGGACTCTGCAGCGTCTTTTAATAAAGGAAGTATAAGTAAGATACTAGTTGATATTGTTAACCAAATTCCCATGGTGTTACAATGTTTATATTCTATTGGGACACATTTCACAAGAAGCAAACTCAACAATACGAAGACTGTCCTCGTGAATGCTGAGTTGGTGCTTCGGATTGCAAATGAGCATAGCGAGGAAGAAGTGCCGCCGCCACAGCTTCTAATTTATCGGTTTCTTTGCGACGAATTGGATGCTATGTTTACTGATGTTAACTGTTTTGTTGGCTATGAGGATTCCGATTCCAAACCAAGAAAGATGCTCAATGGATTTATCTTAGACTGTGTTATGGAATATCTAGAATCTAACTGTTGCCAATATTTTCACTCTGGATTCAAGGCGTGGACGATGCTTCCGTTATGCATCAAAGCCGGGACGTTGACTCAAGCGGTCACAAGAGAGGTGAATAAGTGGGCGTATATGGTTGGGATGGTACCCGACGAAATAATCGAATGGGAGATGAGTCATTCCCTTGGGAAATGGGATGACTTCAATATCGAAGCATTTGAGGCCGGTGTTGATATAGATGGAGATATACTTCATAATTTGGTCGATGAAGTTGTTGAAGAGTTTGTAGGTTGCATGCATAGTTCTTATGCCTTTTGA 2847 0.4222 MSDSSVKNLAITDKVQKPGGCVGIFFQLIDWKKRLVKKKLFSKKLLTPARAKKFRGDEKMRNSKLHLIANENSGGFPKGGSHGVDVEQKSEMRVPSLVARLMGLDSIPAAQREKSKKALCPDYSCGDEKECLSNHCELDRQGKDLEIRVVKHDLRPQKLQKTEVCERNAVTRFGAEALHIKSVLSRAKKYNQHHNHHHPKLASPLKSPRVNSGKSGSRGSRLIGAAAKILEPGLHSSRGKGSLTYHASTCPLKTGIGTDGVGNKSPVMQNQSCYASSTAKPLTGQSSCKNCGNLLDVIDCTVEVRGPPDVPPPIVSDVEINATSMVSLIKKGKSFAPSQEQGRDIILPRSQGKFSSSVADEEGKNYAQRSRNEPTTIRIPMPREGPPKCSSSCQPLRAQEDDASSFAYKHKTQESRLSSEGSSSGSTSSSTQVKRVSSYASTASGTKDFVALNRSVSGRTRMRSPTKVDSSKFDLEKKPCYRQQHESSSHVRALERKRRTVNVTQLEGTTPANSVGLKQRNLRRDAIVGKRRDFDSSSLKSSNVKAKGRGQEEPVKVSHNRNNDAVSFTFNSHLKQKTGMPVKVEETSINNERNKYFQKPSPLKVDDLSGFLEQKLKELTSRKNESATNALPQKSSAAILQELISALSSESLICHDGHMHNEDAGFFGEAKHERLLGTSCNENHLSPGSVLEASFSSSSLDESSGRGFHPDSMTFSYSQAELMEQDDELLDSAASFNKGSISKILVDIVNQIPMVLQCLYSIGTHFTRSKLNNTKTVLVNAELVLRIANEHSEEEVPPPQLLIYRFLCDELDAMFTDVNCFVGYEDSDSKPRKMLNGFILDCVMEYLESNCCQYFHSGFKAWTMLPLCIKAGTLTQAVTREVNKWAYMVGMVPDEIIEWEMSHSLGKWDDFNIEAFEAGVDIDGDILHNLVDEVVEEFVGCMHSSYAF 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01766 948 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 937 - -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 334 442 - -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 417 442 - -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 533 558 - -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 456 493 - -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 350 375 - -
Vifa5g01766 948 Pfam DUF761-associated sequence motif 87 112 IPR032795 -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 465 493 - -
Vifa5g01766 948 Pfam Domain of unknown function (DUF4378) 776 933 IPR025486 -
Vifa5g01766 948 MobiDBLite consensus disorder prediction 190 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01766 Vifa-Chr5 519614885 519618876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01766 10 938 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.897 1.92e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01766 - - aprc:113861902 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01766 5 519614885 519618876 Vifa5g01766 5 519614885 519618876 ECH