Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01740 ATGAGTGGTTCCCTATTTTCTCTTCGCATTATTGTTTCTTTACTTTTCCTTTTCATGTTCTTGCTAGAACCCGTCTATGGCACCAAAAAGTGTTATATTGTGTACTTGGGAGCACATTCTCATGGTCCTAACCCTACATCTCTTCAACTTAAATTTGCTACCAATTCTCACTATGATTTACTAAGTTCAACCTTGGGCAGTCGAGAGAGAGCAAAAGAAGCAATCATTTATTCATATAACAAACACATCAATGGATTTGCTGCTCTACTTGAAGAGGACCAAGCATCAGATATTGCAAAAAAAGCAAATGTAGTGTCTGTATTCTTGAGCAAATCTCATAAACTGCACACTACTCGTTCATGGGAATTTCTTGGACTGCGTAGAAATGGTAACACTGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATAATTGCCAACATTGACACTGGTGTCTGGCCGGAATCCAAGAGCTTCCGCGACAAAGGATTTGGCCCCATTCCATCGAAATGGCGTGGGGGCAAAGCTTGTCAAATTCAAAAATTTGGCAAACTCAAGAAAAATCCTTGCAACAGGAAGCTAATTGGAGCAAGATTCTTCAGCAATGCTTATGAAGCATATTATGGAAAGCTTCATCCATCGCTGCTTACCGCACGCGACTTTGTAGGCCACGGAACTCACACTCTATCAACAGCGGGTGGAAACTTTGTTCCAGGAGCAAGTATATTTGCTATTGGGAATGGCACTGTAAAAGGCGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCTCTAACAGATGTTGCTGACTGCTTTGGTGCTGATGTGTTAGCTGCTATTGATCAAGCCATTAGCGATGGTGTTGATATAATCTCACTTTCCGCTGCTGGCCAGTACCTTGTTAATCCCGAAGATATTTTTACAGACGAGGTTTCAATAGGTGCATTTCATGCACTTTCTAGAAATATATTATTAGTTGCTTCTGCAGGAAATGATGGACCAACACCAGGAAGTGTTGTGAATATTGCTCCATGGGTATTCACAATTGCTGCAAGTACATTAGACAGAGACTTTAGCAGTACTATAACTTTTGGCAACAATCAACAAGTGACGGGAGCCAGTCTTTTTGTAAACTTGCCACCAAACAAAGCCTTTTCTTTGATTCTTGCTACGGATGGTAAGCTTGCCAATGCGACAGATCGTGACGCACAACTTTGTAGGCCGGGAACACTTGATCCTACAAAAGTGAAGGGAAAAATAGTGGCATGCAGTCGAGAAGGAAATATAAAATCAGTTGCTGAAGGTCAGGAAGCTTCATCTGCAGGCGCAAAGGGAATGCTTTTGAGCAATCGACCACAACAAGGGAGAACCACTCTCGCTGAGCCTCATGTTTTGTCTTGTGTTGACGCACAACATGAAAGCAATTACACAACTTCAAAAAATATAAGCGATTACCACTCTTCAAAACATGGAGGGTCACATGTTTCTGACTTTGACATAACATCAATGGACTCTAAATTAAAGTCAGGTACTACAATAAGGTTTTCAGGAGCAAAAACATTTTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCCAACAAAATTCAGCCGTCAATACTCAAGCCTGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCACTGTTCGCAAGTGCATCCAACTTACTAACAGACAATCGCCGAGGAGTTCCATTCAACGTACTACAAGGAACCTCTATGTCTTGCCCTCATGTGGCTGGAATTGCAGGACTTATCAAAACAGTCCATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACAGCAACCACACGAGATAACACGAACAAGCCAATTCAGGATGCGTTTGCCAAAAAACTGGCAACTCCATTTGCTTATGGTTCGGGGCATGTACAACCTGACCCTGCAATAGATCCTGGACTAGTTTATGATCTAGGCATCAAGGATTACTTGAACTTCTTATGTGCTTATGGGTACAACCAACAGCTCATTTCAGCACTTAATTTCAACGGTACATTTACGTGTTCCGGATCTCACAGTATAGAAGACTTGAACTACCCCTCAATCACATTACCAAATCTTGGTTTATATGTCGTTAACGTGACTCGCACAGTCACCAATGTTGGATCACCAAGTACATATTCTGCAAAAGTCTATTTGCCTGGATATAAAATTGCCGTCGTACCGAATTCCTTGACTTTCAAGAAAATTGGTGAAAAGAAAACATTCCAAGTTATTGTGCAGGCAACCAATGTGACTCCAAGGAGGAAATACCAATTCGGGGATTTGAAATGGACTGATGGAAAACACATTGTAAGGAGTCCTATCACGGTTAAGCGCAGATAA 2409 0.4172 MSGSLFSLRIIVSLLFLFMFLLEPVYGTKKCYIVYLGAHSHGPNPTSLQLKFATNSHYDLLSSTLGSRERAKEAIIYSYNKHINGFAALLEEDQASDIAKKANVVSVFLSKSHKLHTTRSWEFLGLRRNGNTAWQKGRFGENTIIANIDTGVWPESKSFRDKGFGPIPSKWRGGKACQIQKFGKLKKNPCNRKLIGARFFSNAYEAYYGKLHPSLLTARDFVGHGTHTLSTAGGNFVPGASIFAIGNGTVKGGSPRARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDIISLSAAGQYLVNPEDIFTDEVSIGAFHALSRNILLVASAGNDGPTPGSVVNIAPWVFTIAASTLDRDFSSTITFGNNQQVTGASLFVNLPPNKAFSLILATDGKLANATDRDAQLCRPGTLDPTKVKGKIVACSREGNIKSVAEGQEASSAGAKGMLLSNRPQQGRTTLAEPHVLSCVDAQHESNYTTSKNISDYHSSKHGGSHVSDFDITSMDSKLKSGTTIRFSGAKTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLLTDNRRGVPFNVLQGTSMSCPHVAGIAGLIKTVHPNWSPAAIKSAIMTTATTRDNTNKPIQDAFAKKLATPFAYGSGHVQPDPAIDPGLVYDLGIKDYLNFLCAYGYNQQLISALNFNGTFTCSGSHSIEDLNYPSITLPNLGLYVVNVTRTVTNVGSPSTYSAKVYLPGYKIAVVPNSLTFKKIGEKKTFQVIVQATNVTPRRKYQFGDLKWTDGKHIVRSPITVKRR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01740 802 Gene3D Peptidase S8/S53 domain 143 671 IPR036852 GO:0004252|GO:0006508
Vifa5g01740 802 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Vifa5g01740 802 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Vifa5g01740 802 PRINTS Subtilisin serine protease family (S8) signature 587 603 IPR015500 -
Vifa5g01740 802 FunFam Subtilisin-like protease SBT5.3 22 116 - -
Vifa5g01740 802 CDD PA_subtilisin_like 364 491 - -
Vifa5g01740 802 CDD Peptidases_S8_3 113 624 IPR034197 -
Vifa5g01740 802 Gene3D - 358 525 - -
Vifa5g01740 802 ProSiteProfiles Serine proteases, subtilase domain profile. 120 658 - -
Vifa5g01740 802 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 799 IPR045051 -
Vifa5g01740 802 SUPERFAMILY Subtilisin-like 115 662 IPR036852 GO:0004252|GO:0006508
Vifa5g01740 802 Pfam Subtilase family 140 628 IPR000209 GO:0006508|GO:0008236
Vifa5g01740 802 ProSitePatterns Serine proteases, subtilase family, serine active site. 588 598 IPR023828 -
Vifa5g01740 802 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Vifa5g01740 802 Gene3D - 675 801 - -
Vifa5g01740 802 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 116 IPR037045 -
Vifa5g01740 802 FunFam Subtilisin-like protease SBT1.5 142 370 - -
Vifa5g01740 802 Pfam Fibronectin type-III domain 704 799 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01740 Vifa-Chr5 508281868 508285741 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01740 32 800 Subtilisin-like Serine Gene Family AT2G04160 52.320 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01740 - - gmx:100813564 1213.36