Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01735 ATGGGTGGTGGTTCCCTATTTTCTCTTCACATTATTGTTTCTTTACTTTTCCTTTTTATGTTCTTGCTAGAACCCGTCTATGGAACTAAAAAGTGTTATATTGTATACTTGGGAGCACATTCTCATGGTCCTAACCCTACATCTCTTCAACTTGAAATTGCTACCAATTCTCATTACGATTTACTAAGTTCAACTTTGGGCAGTCGAGAGAGAGCAAAAGAAGCAATCATTTATTCATATAACAAACACATCAATGGATTTGCTGCTCTACTTGAAGAGGACCAAGCAGCAGATATTGCAAAAAAAGCAAATGTAGTGTCTGTATTCTTGAGCAAATCTCATAAACTGCACACTACTCGTTCATGGGAATTTCTTGGACTGCGCAGAAATGGTAACACTGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATAATTGCCAACATTGACACTGGTGTTTGGCCGGAATCCAAGAGCTTCAGCGACAAAGGATTTGGCCCCATTCCATCGAAATGGCGTGGGGGCAAAGCTTGTCAAATTCAAAAATTTGGCAAACTCAAGAAAAATCCTTGCAACAGGAAGCTAATTGGAGCAAGATTCTTCAGCAATGCTTATGAAGCATATTATGGCAACCTTCATCCATCGCTACTCACCGCACGCGACTTTGTAGGTCACGGAACTCACACTCTATCAACAGCGGGTGGAAACTTTGTTCCAGGAGCAAGTATATTTGCTATTGGGAATGGTACTGTAAAAGGCGGTTCACCAAGAGCTAGAGTTGCAACCTACAAAGTGTGTTGGTCTCTAACAGATGTTGCTGACTGCTTTGGGGCTGATGTGTTAGCTGCTATTGATCAAGCCATTAGCGATGGTGTTGATATAATCTCACTTTCGGCTGCTGGCCAGTACCTTGTTAATCCCGAAGATATTTTTACAGACGAGGTTTCAATAGGTGCATTTCATGCACTTTCTAGAAATATATTATTAGTTGCTTCTGCAGGAAATGATGGACCAACACCAGGAAGTGTTGTAAATGTTGCTCCATGGGTATTCACAATTGCTGCAAGTACATTAGACAGAGACTTTAGCAGTACTATAACTTTTGGCAACAATCAACAAGTGACGGGAGCCAGTCTTTTTGTAAACTTGCCACCAAACAAAGCCTTTTCTTTGATTCTTGCTACGGATGGTAAGCTTGCCAATGCGACAGATCGTGACGCACAACTTTGTAGGCCGGGAACACTTGATCCTACAAAAGTGAAGGGAAAAATAGTGGCATGCAGTCGAGAAGGAAATATAAAATCAGTTGCTGAAGGTCAGGAAGCTTCATCTGCAGGCGCAAAGGGAATGCTTTTGAGCAATCGACCACAACAAGGGAGAACCACTCTCGCTGAGCCTCATGTTTTGTCTTGTGTTAGTCAGCCACATCAAGAAAACATTTACCATCCTCCTGCTTTACCAGAACGTGGAGGGTCACGTGCTCCTGCCTTTGACATAACGGACTCTAAATTAAAAACAGGTACCACAATAAGGTTTTCAGGAGCAAGAACATTCTATGGAAGAAAGCCAGCTCCAGTAATGGCTTCATTCTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATGTAACTGCACCAGGTGTGAACATACTTGCTGCCTATTCACTATTCGCAAGTGCATCCAACTTACTAACAGACAATCGCCGAGGAGTTCCATTCAACGTACTACAAGGAACCTCTATGTCTTGCCCTCATGTGGCTGGAATTGCAGGACTTATCAAAACAGTCCATCCTAATTGGAGTCCAGCAGCTATTAAATCAGCTATCATGACCACAGCAACCACACGAGATAATACGAACCAGCCAATTCAGGATGCATTTGACAAAAAACTGGCAACTCCATTTGCTTATGGTTCGGGGCATGTACAACCTGACCCTGCAATAGATCCTGGACTAGTTTATGATCTAGGCATTAAGGATTACTTGAACTTCTTATGTGCTTATGGGTACAACAACCAGCTCATTTCAGCACTTAATTTCAACGGTACATTTACCTGTTCCGGATCTCACAGTATAGAAGACTTGAACTACCCTTCAATCACATTACCAAATCTTGGTTTATACGTCGTTAACGTAACTCGCACAGTCACCAATGTTGGATCACCAAGTACATATTCTGCAAAAGTCCATTTGCCTGGATATAAAATTGCTGTTATACCAAACTCGTTGACTTTCAAGAAAATTGGTGAAAAGAAAACATTCAAAGTTATTGTGCAGGCAACCAATGTGACTCCAAGGGGGAAATACCAATTTGGGGATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGTCCTATCACAGTTAAGCGCAGATAA 2391 0.4178 MGGGSLFSLHIIVSLLFLFMFLLEPVYGTKKCYIVYLGAHSHGPNPTSLQLEIATNSHYDLLSSTLGSRERAKEAIIYSYNKHINGFAALLEEDQAADIAKKANVVSVFLSKSHKLHTTRSWEFLGLRRNGNTAWQKGRFGENTIIANIDTGVWPESKSFSDKGFGPIPSKWRGGKACQIQKFGKLKKNPCNRKLIGARFFSNAYEAYYGNLHPSLLTARDFVGHGTHTLSTAGGNFVPGASIFAIGNGTVKGGSPRARVATYKVCWSLTDVADCFGADVLAAIDQAISDGVDIISLSAAGQYLVNPEDIFTDEVSIGAFHALSRNILLVASAGNDGPTPGSVVNVAPWVFTIAASTLDRDFSSTITFGNNQQVTGASLFVNLPPNKAFSLILATDGKLANATDRDAQLCRPGTLDPTKVKGKIVACSREGNIKSVAEGQEASSAGAKGMLLSNRPQQGRTTLAEPHVLSCVSQPHQENIYHPPALPERGGSRAPAFDITDSKLKTGTTIRFSGARTFYGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSLFASASNLLTDNRRGVPFNVLQGTSMSCPHVAGIAGLIKTVHPNWSPAAIKSAIMTTATTRDNTNQPIQDAFDKKLATPFAYGSGHVQPDPAIDPGLVYDLGIKDYLNFLCAYGYNNQLISALNFNGTFTCSGSHSIEDLNYPSITLPNLGLYVVNVTRTVTNVGSPSTYSAKVHLPGYKIAVIPNSLTFKKIGEKKTFKVIVQATNVTPRGKYQFGDLQWTDGKHIVRSPITVKRR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01735 796 CDD Peptidases_S8_3 114 618 IPR034197 -
Vifa5g01735 796 Gene3D Peptidase S8/S53 domain 144 665 IPR036852 GO:0004252|GO:0006508
Vifa5g01735 796 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 117 IPR037045 -
Vifa5g01735 796 SUPERFAMILY Subtilisin-like 116 656 IPR036852 GO:0004252|GO:0006508
Vifa5g01735 796 FunFam Subtilisin-like protease SBT1.5 143 371 - -
Vifa5g01735 796 ProSitePatterns Serine proteases, subtilase family, serine active site. 582 592 IPR023828 -
Vifa5g01735 796 Pfam Subtilase family 141 624 IPR000209 GO:0006508|GO:0008236
Vifa5g01735 796 FunFam Subtilisin-like protease SBT5.3 23 117 - -
Vifa5g01735 796 Gene3D - 669 795 - -
Vifa5g01735 796 ProSiteProfiles Serine proteases, subtilase domain profile. 121 652 - -
Vifa5g01735 796 Pfam Fibronectin type-III domain 698 793 IPR041469 -
Vifa5g01735 796 CDD PA_subtilisin_like 365 472 - -
Vifa5g01735 796 PRINTS Subtilisin serine protease family (S8) signature 581 597 IPR015500 -
Vifa5g01735 796 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vifa5g01735 796 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Vifa5g01735 796 Gene3D - 359 519 - -
Vifa5g01735 796 Pfam Peptidase inhibitor I9 33 117 IPR010259 -
Vifa5g01735 796 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 793 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01735 Vifa-Chr5 506229008 506232799 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01735 33 794 Subtilisin-like Serine Gene Family AT2G04160 52.926 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01735 - - gmx:100813564 1217.99