Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01734 ATGACCCAAGTGTTACATGTATACTTGGGAGCACATACACATGGTCCAACTCCTTCCGCTGCTGACCTTGAAATTGCTACAACTTCTCATTATGATTTACTAGCTTCAATCTTGGGAAGTGAGGAGAATGCAAAAGAAGCAATTGTTTATTCATATAATAAGCAGATAAATGGGTTTGCAGCTATACTTGAAGAGGAAGAAGCTGCACAAATTGCAAAAAATGGAAAAGTGGTATCAGTGTTCTTGAGTAAAGAGCATAAACTGCACACTACACGTTCATGGGAATTTCTCGGATTGCGTAGAAATGATATGAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAAAATGCTATCATAGCTAACATTGATACAGGTGTTTGGCCTGAATCAATGAGTTTTAGTGACAGAGGAATAGGCCCAATTCCAACAAAATGGCGTGGTGGTAACATATGTCAAATTAACAAACACAATGGTTCTACCAAAGTTCCATGTAACAGGAAGCTAATTGGCGCAAGATTTTTCAACAACGCATACGGATTAGTCAAGGGAAAACTCCCTCGTTCGCAACAAACAGCGCGCGACTTTGTAGGCCACGGTACACACACAATCATGGGAGCAAGTCTTTTTGTAAACTTGCCACCTAACAAGTCTTTCACTGTGGTGACTTCTACTAATGCGAAATTGGCAAATGCGACGAAGAGAGATGCGCAGTTTTGTAGAGTAGGAACACTTGATCCTTCAAAAGTGAAGGGTAAAATATGTTAG 765 0.4052 MTQVLHVYLGAHTHGPTPSAADLEIATTSHYDLLASILGSEENAKEAIVYSYNKQINGFAAILEEEEAAQIAKNGKVVSVFLSKEHKLHTTRSWEFLGLRRNDMNSAWQKGRFGENAIIANIDTGVWPESMSFSDRGIGPIPTKWRGGNICQINKHNGSTKVPCNRKLIGARFFNNAYGLVKGKLPRSQQTARDFVGHGTHTIMGASLFVNLPPNKSFTVVTSTNAKLANATKRDAQFCRVGTLDPSKVKGKIC 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01734 254 CDD PA_subtilisin_like 201 253 - -
Vifa5g01734 254 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 89 IPR037045 -
Vifa5g01734 254 SUPERFAMILY Subtilisin-like 72 202 IPR036852 GO:0004252|GO:0006508
Vifa5g01734 254 Pfam Peptidase inhibitor I9 26 89 IPR010259 -
Vifa5g01734 254 Gene3D Peptidase S8/S53 domain 90 227 IPR036852 GO:0004252|GO:0006508
Vifa5g01734 254 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 43 203 IPR045051 -
Vifa5g01734 254 FunFam Subtilisin-like protease SBT5.3 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01734 Vifa-Chr5 506214444 506217949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01734 196 253 Subtilisin-like Serine Gene Family AT2G04160 47.458 2.94e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01734 - - gmx:100803751 329.717