Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01733 ATGCCTATGGCATGTGTTAGAGAAGGGAAAATAAATTCAGTTGCTGAGGGTCAAGAAGCTTTATCTGCAGGTGCTAAGGGAGTCATTTTGAGAAATCAACCGCTAGTTAATGGAAGAACACTTCTTTCTGAGCCTCATATTTTGTCTACTGTCAGCTATTATTCCAAACATCAAATAACAAGGCAACATAGTGAAGACCTAATTCCGTCGGATATATACTCCAGTTATGGCTTCATACTCAAGCCTGATGTAACTGCACCGGGTGTGAACATACTTGCTGCCTATTCATTGTTTGCAAGTGCTTCTAATTTAATAACAGACACTCGTCGAGGTTTTCCATTCAATGTGATGCAAGGAACATCTATGTCTTGTCCTCATGTTGCTGGCACTGCTGGATTAATCAAAACACTTCATCCTAATTGGTCTCCAGCAGCTATTAAATCAGATATCATGACCACCGCAAGCACAAGAGATAACACCAACAAGCCAATCCGTGACGCATTTGATAAAACATTGGCAAATCCATTTGCTTATGGTTCAGGACACATTCAACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATCTAAGCATTATTGATTACTTGAACTTCTTATGTGCTTCTGGATACAACCAACAACTCATTTCATCACTTAATTTCAACAAGAGCTTTACTTGTTCAGGATCTCCTAGCATAACAGACTTGAATTACCCTTCAATCACGTTGCCAAATCTTGGATTAAATGTCCTTAACGTCACAAGGACCGTCACCAATGTTGGACCACCTAGTACATATTTTGCAAAAGCTCAATTGTCGGGATATAAAGCAACAAATGTGTCTCCAAGGAAGAAATATCAATTTGGTGAATTGAAATGGACAAATGGGAAACATATTGTAAGGAGTCCTATCACTGTTCGACGCAAGTGA 930 0.3935 MPMACVREGKINSVAEGQEALSAGAKGVILRNQPLVNGRTLLSEPHILSTVSYYSKHQITRQHSEDLIPSDIYSSYGFILKPDVTAPGVNILAAYSLFASASNLITDTRRGFPFNVMQGTSMSCPHVAGTAGLIKTLHPNWSPAAIKSDIMTTASTRDNTNKPIRDAFDKTLANPFAYGSGHIQPNSAIDPGLVYDLSIIDYLNFLCASGYNQQLISSLNFNKSFTCSGSPSITDLNYPSITLPNLGLNVLNVTRTVTNVGPPSTYFAKAQLSGYKATNVSPRKKYQFGELKWTNGKHIVRSPITVRRK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01733 309 SUPERFAMILY Subtilisin-like 66 193 IPR036852 GO:0004252|GO:0006508
Vifa5g01733 309 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 306 IPR045051 -
Vifa5g01733 309 Gene3D Peptidase S8/S53 domain 77 202 IPR036852 GO:0004252|GO:0006508
Vifa5g01733 309 Pfam Subtilase family 73 162 IPR000209 GO:0006508|GO:0008236
Vifa5g01733 309 ProSitePatterns Serine proteases, subtilase family, serine active site. 119 129 IPR023828 -
Vifa5g01733 309 Gene3D - 206 284 - -
Vifa5g01733 309 Pfam Fibronectin type-III domain 235 283 IPR041469 -
Vifa5g01733 309 ProSiteProfiles Serine proteases, subtilase domain profile. 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01733 Vifa-Chr5 506193344 506196392 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01733 3 307 Subtilisin-like Serine Gene Family AT2G04160 41.899 3.57e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01733 - - gmx:100803751 455.677