LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa5g01693	ATGGATTCCCTTTCTCTTCTCCTCTCTTATCCAAAACTCTCCCCCACAAAGCCCTTCTCCTTTCTCTCAAACCCTAATTCACCCCTCTCTGCATCTCTTCCCAACAAAAAACCCCAAATCCCCTCCCTCAAACCCCATTCTCCAATCTCACTCCAAAACCCCCTCACAAAATCATGCTTTTCCCTCGCTACAATCAACCTCTTCACTCCCCTCCACTCCCTCGCTGCCGAACCCACTTTACCCTTATCAGACGCAGGCAGAATCAACTTAGAAACAATCCTTATCTCCATTGACGATTTCTTCAACCGATACCCATTTTTCGTTGCTGCGTGCAGCTTCGTTTATCTCGTTGGTATTCCCTTAGCAGAAGAGTATTTCAGGAAGTATAAGTTTGTGTCAGCTATTGACGCTTTCAGGAAGCTCCGGGATGAACCGGATTCGGAGCTGTTGGATATAAGGGATAGGAAGAATGTGAAGTTTCTTGGGTCTCCTAATTTGATGATGTTGAAGAAGCAAGTGGTGCAGGTTGAGTTTAAGGAGGGGAATGAAGATGGGTTTGTGAAGAAAGTTTTGGAGATGTTTGAGGATGCTGAGAATACTGTTGTGTTTATTTTGGACAGTTTTGACGGTAATTCCATGAAAGTTGCTGAATTGTTATTCAAGAATGGTTTTAAAGAGGCCTATGCCATCAAAGGTGGAGTTAGAGGCCAGCAAGGGTGGATGGCTATACAGGATACCCTTTTGCCCCCTTCGGTGCATATCAACCGAAGAAAAAAGACTAAAGTGCAACAAGAGCTCAGTACAAATGGAAATGGGTCCATTCAGCAAAATGATTGTAATAATGACAGTGTGTTATCCTCAGATATTCCTGCAGTTGGAAACCAAGAGACGGAAAATGGTCGTGTGAAAAGGTCTGTTGAGTCCAATCCGAAATTGAAACTCGGATCGATAGTTTCCCATTCTCCCTATCCCAATTACCCAGATTTGAAGCCGCCATCATCTCCAACTCCATCAAAGCCACAATGA	1026	0.4405	MDSLSLLLSYPKLSPTKPFSFLSNPNSPLSASLPNKKPQIPSLKPHSPISLQNPLTKSCFSLATINLFTPLHSLAAEPTLPLSDAGRINLETILISIDDFFNRYPFFVAACSFVYLVGIPLAEEYFRKYKFVSAIDAFRKLRDEPDSELLDIRDRKNVKFLGSPNLMMLKKQVVQVEFKEGNEDGFVKKVLEMFEDAENTVVFILDSFDGNSMKVAELLFKNGFKEAYAIKGGVRGQQGWMAIQDTLLPPSVHINRRKKTKVQQELSTNGNGSIQQNDCNNDSVLSSDIPAVGNQETENGRVKRSVESNPKLKLGSIVSHSPYPNYPDLKPPSSPTPSKPQ	341

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa5g01693	341	MobiDBLite	consensus disorder prediction	265	294	-	-
	Vifa5g01693	341	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	114	240	IPR036873	-
	Vifa5g01693	341	Gene3D	-	128	252	IPR036873	-
	Vifa5g01693	341	PANTHER	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	50	251	IPR044240	-
	Vifa5g01693	341	MobiDBLite	consensus disorder prediction	265	341	-	-
	Vifa5g01693	341	MobiDBLite	consensus disorder prediction	325	341	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa5g01693	Vifa-Chr5	497242529	497245336	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa5g01693	7	241	Sulfurtransferasese or Rhodanese	AT4G01050	33.061	3.94e-27	109

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa5g01693	-		-	gmx:100815667	384.03