Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01655 ATGTGTGGGATATTCGCGTATCTGAATTACAACGTGGAAAGAGAGAGAAGTTACATCTTGCAGGTTCTTTTCAACGGTTTAAGACGGTTAGAGTATCGCGGTTACGATTCCGCCGGAATCGCCATCGATTCTTCTTCTCCACCACCTAAACCTCAATGCTCCTCCGATTCCGAATTCATTTCTTCTCCTCCTCTTGTCTTCCGCCAAGAAGGCAACATCGAGTCCCTCGTTAAATCCGTCTACAAAGAAGTGGATGAAATTGAACTGAATTTGAAGGAGAGTTTCAGTATTCATGCTGGAATTGCGCACACGCGTTGGGCTACACACGGTGAGCCTGCTCCGCGGAACAGTCATCCCCAAACTTCAGGTCCTGCTAACGAATTCATGGTTGTTCACAATGGTGTTATCACTAATTATGAGGTTTTGAAGGCAACACTGATCCTACATGGCTTCGAGTTTAAATCCGAAACTGATACAGAAGTCATTCCCAAACTTGCCAAGTTTGTTTATGATAAAGCAAATGAAGCTGCTGGTGATCAGGTTGTTACCTTCAGTCAAGTTGTGCTGGAAGTTATGAGGCATCTTGAAGGAGCCTATGCACTTATTTTCAAAAGTTCATATTATCCTAATGAATTGATTGCTTGCAAGCGTGGTAGCCCGCTGCTCCTAGGTGTTAAAGAATTGGAAGAAAATAAGGATAATGGCTCCGGCTTTGAGGAAAACAAATTCCTATCAAAAGATGGAAAACCCAAGGAATTGTTTTTGTCCAGTGATGCTAATGCTGTGGTTGAGCATACCAAGAAAGTGCTAGTTATTGAAGATGGTGAAGTTGTGCATATCAAGGATGGCGGGGTTTCTATTTTGAAGTATGAGAATGACATGGGAAAACCCGGCACTTTCTCCAGAGCTTCTTCGGTGCGACGTGCATTATCTGTTCTTGAAATGGAGGTTGAGCAAATAAATAAAGGACATTATGAGCATTATATGCAAAAAGAAATTCATGAGCAACCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATACGTGGGGGGTCTAGCAAATCCAAGTCTGTTCTGTTAGGTGGACTGAAGGATCACCTCAAAACTATCAGGCGAAGTAGAAGAATAGTTTTCATTGGTTGTGGAACAAGTTATAATGCTGCTTTGGCAGCTAGACCAATCTTTGAAGAACTTTCTGGTATTCCTGTCACTATGGAAATTGCTAGCGACTTATTGGATCGGGAGGGACCAATATACCGGGAAGATACAGCCGTTTTTGTTAGTCAATCTGGCGAAACTGCAGATACTTTACTTGCACTGCAATATGCTTTAGAAAATGGTGCATTATGTGTTGGGGTAACAAATACTGCTAGTAGTGCAATAGCAAGGAACACACATTGCGGTGTTCATATAAATGCAGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGCCAAATAGTAGTGATGGCCATGCTGTCTCTTGCAATAGGAGGCGATACTATTTCCACTAAAGCAAGAAGAGAAGCTATCATAGATGGTCTTTATGACCTGCCAAACAAAGTCAGAGAGGTGCTGGAGCTTGATCAAGAGATGAAGGATCTAGCAAATCTATTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACCGCACTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTCGCGGGCGAAATGAAGCACGGTCCTTTGGCATTGGTCGATGAAAGTCTCCCAATTGTTGTTATTGCTACACGTGATGCTTGCTTCAGCAAACAGCAGTCTGTTATTCAACAACTTCATGCCCGTAGAGGTCGTCTGATAGTTTTGTGTTCAGAAGGGGATGCTGCATCTGTATGCCCTGGTAAATCTTGTAGGACAATTGAAGTACCACAGGTTGAAGATTGTCTTCAACCTGTGATTAATGTAGTTCCGTTACAGTTACTGGCATATCATCTCACTGTACTGAGGGGATTTAACGTTGACCAGCCTCGGAATCTTGCTAAGAGTGTTACTACGCAGTAA 2076 0.4311 MCGIFAYLNYNVERERSYILQVLFNGLRRLEYRGYDSAGIAIDSSSPPPKPQCSSDSEFISSPPLVFRQEGNIESLVKSVYKEVDEIELNLKESFSIHAGIAHTRWATHGEPAPRNSHPQTSGPANEFMVVHNGVITNYEVLKATLILHGFEFKSETDTEVIPKLAKFVYDKANEAAGDQVVTFSQVVLEVMRHLEGAYALIFKSSYYPNELIACKRGSPLLLGVKELEENKDNGSGFEENKFLSKDGKPKELFLSSDANAVVEHTKKVLVIEDGEVVHIKDGGVSILKYENDMGKPGTFSRASSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPIFEELSGIPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALENGALCVGVTNTASSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLSLAIGGDTISTKARREAIIDGLYDLPNKVREVLELDQEMKDLANLLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDESLPIVVIATRDACFSKQQSVIQQLHARRGRLIVLCSEGDAASVCPGKSCRTIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGFNVDQPRNLAKSVTTQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01655 691 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 2 304 - -
Vifa5g01655 691 CDD SIS_GlmS_GlmD_2 533 689 IPR035490 -
Vifa5g01655 691 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 290 IPR029055 -
Vifa5g01655 691 CDD GFAT 2 280 IPR047084 -
Vifa5g01655 691 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 299 IPR029055 -
Vifa5g01655 691 ProSiteProfiles SIS domain profile. 538 681 IPR001347 GO:0097367|GO:1901135
Vifa5g01655 691 Pfam SIS domain 371 496 IPR001347 GO:0097367|GO:1901135
Vifa5g01655 691 Pfam SIS domain 542 673 IPR001347 GO:0097367|GO:1901135
Vifa5g01655 691 ProSiteProfiles SIS domain profile. 367 506 IPR001347 GO:0097367|GO:1901135
Vifa5g01655 691 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 283 IPR017932 -
Vifa5g01655 691 SUPERFAMILY SIS domain 322 690 IPR046348 GO:0097367|GO:1901135
Vifa5g01655 691 CDD SIS_GlmS_GlmD_1 376 501 IPR035466 -
Vifa5g01655 691 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 691 - -
Vifa5g01655 691 Pfam Glutamine amidotransferase domain 98 212 - -
Vifa5g01655 691 Gene3D - 527 676 - -
Vifa5g01655 691 FunFam Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 323 540 - -
Vifa5g01655 691 Gene3D - 323 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01655 Vifa-Chr5 487680326 487686901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g01655 101 224 PRT Gene Family AT2G16570 28.125 1.27e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01655 K00820 - gmx:100779312 1177.54